RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ADAM22Q9P0K1 906 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 NFU1Q9UMS0 254 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 ESYT3A0FGR9 886 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 H3BQF6 201 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 KRT19P08727 400 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 ITGA4P13612 1032 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CD58P19256 250 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 RRM1P23921 792 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CTNNA2P26232 953 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 SLC1A1P43005 524 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 AARSP49588 968 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDPN-201ENST00000294489 RWDD2BP57060 319 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 NOMO3P69849 1222 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 TMEM62Q0P6H9 643 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 TERF2Q15554 542 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PASD1Q8IV76 773 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PPP1R13LQ8WUF5 828 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 ZNF606Q8WXB4 792 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 KRT35Q92764 455 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CD101Q93033 1021 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 CYP3A43Q9HB55 503 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PRDM10Q9NQV6 1147 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 AMACRQ9UHK6 382 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PCDHGC3Q9UN70 934 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 PCDHA3Q9Y5H8 950 aa9.73□□□□□ -0.85
PDPN-201ENST00000294489 GOLGA6BA6NDN3 693 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 ZSCAN5CA6NGD5 496 aaPredicted RBP9.72□□□□□ -0.85
PDPN-201ENST00000294489 KCNE1P15382 129 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 PEX5P50542 639 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 PTP4A2Q12974 167 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 HLTFQ14527 1009 aaKnown RBP eCLIP9.72□□□□□ -0.85
PDPN-201ENST00000294489 KCNA10Q16322 511 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 FAM26DQ5JW98 314 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 CXCL17Q6UXB2 119 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 MON1BQ7L1V2 547 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 PHF13Q86YI8 300 aaPredicted RBP9.72□□□□□ -0.85
PDPN-201ENST00000294489 CD99L2Q8TCZ2 262 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 CASKIN2Q8WXE0 1202 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 DDX20Q9UHI6 824 aaKnown RBP9.72□□□□□ -0.85
PDPN-201ENST00000294489 UTP11Q9Y3A2 253 aaKnown RBP9.72□□□□□ -0.85
PDPN-201ENST00000294489 TRPV2Q9Y5S1 764 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 SCINQ9Y6U3 715 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 ASGR1P07306 291 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 VEGFBP49765 207 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 PRMT2P55345 433 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
PDPN-201ENST00000294489 FAM228AQ86W67 206 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 C11orf70Q9BRQ4 267 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 SDCBP2Q9H190 292 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 DPP3Q9NY33 737 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 MTUS1Q9ULD2 1270 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
PDPN-201ENST00000294489 CEP83Q9Y592 693 aa9.72□□□□□ -0.85
PDPN-201ENST00000294489 CABYRO75952 493 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 LSM8O95777 96 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 PAEPP09466 180 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ELNP15502 786 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 MARCKSL1P49006 195 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 RBP5P82980 135 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 INCA1Q0VD86 236 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 TRIM71Q2Q1W2 868 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 ZNF667Q5HYK9 610 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ADAT2Q7Z6V5 191 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 PCSK9Q8NBP7 692 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 WNT8BQ93098 351 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ZMAT2Q96NC0 199 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 RUFY1Q96T51 708 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 RAB17Q9H0T7 212 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 CHST12Q9NRB3 414 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 SNTG2Q9NY99 539 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 SCN1AP35498 2009 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 HSF2BPO75031 334 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 CHRNA1P02708 482 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ITGB3P05106 788 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 WEE2P0C1S8 567 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ZNF394Q53GI3 561 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ALS2CLQ60I27 953 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 SCARA5Q6ZMJ2 495 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 GOLGA6L1Q8N7Z2 621 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 SLC43A3Q8NBI5 491 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 TMEM35BQ8NCS4 154 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 SMG8Q8ND04 991 aaKnown RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.71□□□□□ -0.85
PDPN-201ENST00000294489 TRAIPQ9BWF2 469 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 ZNF518BQ9C0D4 1074 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 CXCL16Q9H2A7 254 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 VPS18Q9P253 973 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 POLIQ9UNA4 740 aa9.71□□□□□ -0.85
PDPN-201ENST00000294489 TRPA1O75762 1119 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 CFHP08603 1231 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 PYGMP11217 842 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 P4HA1P13674 534 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 CYP3A5P20815 502 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 CHRNA3P32297 505 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 DR1Q01658 176 aa9.71□□□□□ -0.86
PDPN-201ENST00000294489 DHX34Q14147 1143 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms