RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CCDC90BQ9GZT6 254 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 MCM8Q9UJA3 840 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 HAO1Q9UJM8 370 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 GPR75-ASB3A0A0A6YYF3 556 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 CIITAP33076 1130 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 SKIV2L2P42285 1042 aaKnown RBP18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 DDX42Q86XP3 938 aaKnown RBP eCLIP18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 TATDN2Q93075 761 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 MMP19Q99542 508 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 CHMP2BQ9UQN3 213 aa18.33■□□□□ 0.53
PCDHA13-201ENST00000289272 CAND2O75155 1236 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 CD44P16070 742 aaKnown RBP18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 PSMC3P17980 439 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 RIPK1Q13546 671 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 SEC23AQ15436 765 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 C4orf33Q8N1A6 199 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 NLRP4Q96MN2 994 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 REEP2Q9BRK0 252 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 TEX12Q9BXU0 123 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 NAGPAQ9UK23 515 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 THRAP10827 490 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 MRPL28Q13084 256 aaKnown RBP18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 NCLNQ969V3 563 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 CYP39A1Q9NYL5 469 aa18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 CPSF3Q9UKF6 684 aaKnown RBP18.33■□□□□ 0.52
PCDHA13-201ENST00000289272 SYNJ2BP-COX16A0A087WUM0 186 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 FAM237AA0A1B0GTK4 181 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 RGL2O15211 777 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 MEA1Q16626 185 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 HAUS6Q7Z4H7 955 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 COX16Q9P0S2 106 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 CDYLQ9Y232 598 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 CAPN6Q9Y6Q1 641 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 SAC3D1A6NKF1 404 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 ANGPT2O15123 496 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 ATP4AP20648 1035 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 COMTP21964 271 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 CNTFP26441 200 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 EIF3EP60228 445 aaKnown RBP18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 THEM5Q8N1Q8 247 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 M0R3G1 203 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 MYL3P08590 195 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 NFKBIAP25963 317 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 KCNMA1Q12791 1236 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 MFSD14CQ5VZR4 134 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 TMEM270Q6UE05 265 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 DSTYKQ6XUX3 929 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 FRA10AC1Q70Z53 315 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 PRPF18Q99633 342 aaKnown RBP18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 BTBD10Q9BSF8 475 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 KLHL8Q9P2G9 620 aaPredicted RBP18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 HEY2Q9UBP5 337 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 TEKT2Q9UIF3 430 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 GOLGA8TH3BQL2 631 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 APOL1O14791 398 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 STX5Q13190 355 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 INTS5Q6P9B9 1019 aaKnown RBP18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 LDHDQ86WU2 507 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 CLEC10AQ8IUN9 316 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 GPD1LQ8N335 351 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 RNPEPL1Q9HAU8 725 aa18.32■□□□□ 0.52
PCDHA13-201ENST00000289272 TNFAIP8O95379 198 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 SDC4P31431 198 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 DNAJC3Q13217 504 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 C11orf63Q6NUN7 778 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 FAR2Q96K12 515 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 C9orf72Q96LT7 481 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 CELF4Q9BZC1 486 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 EPS8L2Q9H6S3 715 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 SMARCAL1Q9NZC9 954 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 TRPC5OSA6NMA1 111 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 NDUFB10O96000 172 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 ZNF844Q08AG5 666 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 INAQ16352 499 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 EFHC1Q5JVL4 640 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 CCNJLQ8IV13 435 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 ZC3H7BQ9UGR2 993 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 CLASP2O75122 1294 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 EIF2S1P05198 315 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 TTC33Q6PID6 262 aaPredicted RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 RFX8Q6ZV50 586 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 EFL1Q7Z2Z2 1120 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 TMC3Q7Z5M5 1100 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 ZNF398Q8TD17 642 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 GCNAQ96QF7 691 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 KIF17Q9P2E2 1029 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 TTI2Q6NXR4 508 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 BEST2Q8NFU1 509 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 FAM151AQ8WW52 585 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 DMAP1Q9NPF5 467 aaPredicted RBP18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 GABBR1Q9UBS5 961 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 ACTL7BQ9Y614 415 aa18.31■□□□□ 0.52
PCDHA13-201ENST00000289272 SMIM31A0A1B0GVY4 71 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 DYTNA2CJ06 578 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms