RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 STAT4Q14765 748 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 RASA2Q15283 850 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 TRIP10Q15642 601 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MIPOL1Q8TD10 442 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 CPA5Q8WXQ8 436 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 MANSC1Q9H8J5 431 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 LIN28AQ9H9Z2 209 aaKnown RBP13.52□□□□□ -0.25
HERC6-202ENST00000273960 WHRNQ9P202 907 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 NENFQ9UMX5 172 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
HERC6-202ENST00000273960 TCP10L2B9ZVM9 353 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 ZNF862O60290 1169 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 LSAMPQ13449 338 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 ALCAMQ13740 583 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 SFT2D3Q587I9 215 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 FAM192AQ9GZU8 254 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 WNT8AQ9H1J5 351 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 PDXKO00764 312 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 PPP1R11O60927 126 aaPredicted RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 SLC25A3Q00325 362 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 R3HDM1Q15032 1099 aaKnown RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 AOC3Q16853 763 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 CTC1Q2NKJ3 1217 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 SCUBE1Q8IWY4 988 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 LENG1Q96BZ8 264 aaPredicted RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 PANX3Q96QZ0 392 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 TDRD3Q9H7E2 651 aaKnown RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 POLRMTO00411 1230 aaKnown RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 C2CD2LO14523 706 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 ZWINTO95229 277 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 IVDP26440 423 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 CCR3P51677 355 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 ADARP55265 1226 aaKnown RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
HERC6-202ENST00000273960 TFDP1Q14186 410 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 TRIM67Q6ZTA4 783 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 ZFPM1Q8IX07 1006 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 CCDC110Q8TBZ0 833 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 KLHL4Q9C0H6 718 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 GINM1Q9NU53 330 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 DOLKQ9UPQ8 538 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 PCDHGA4Q9Y5G9 962 aa13.51□□□□□ -0.25
HERC6-202ENST00000273960 DDX39AO00148 427 aaKnown RBP13.5□□□□□ -0.25
HERC6-202ENST00000273960 DKC1O60832 514 aaKnown RBP eCLIP13.5□□□□□ -0.25
HERC6-202ENST00000273960 ASLP04424 464 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 BCRP11274 1271 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 PEX2P28328 305 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 TREML1Q86YW5 311 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 CFAP57Q96MR6 1250 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 SAE1Q9UBE0 346 aaPredicted RBP13.5□□□□□ -0.25
HERC6-202ENST00000273960 LOC100653049A0A140TA62 436 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 ECE2O60344 883 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 KRT34O76011 436 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 AP2B1P63010 937 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 PDE1CQ14123 709 aaPredicted RBP13.5□□□□□ -0.25
HERC6-202ENST00000273960 RABGAP1LQ5R372 815 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 PRPF39Q86UA1 669 aaKnown RBP13.5□□□□□ -0.25
HERC6-202ENST00000273960 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
HERC6-202ENST00000273960 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 SIKE1Q9BRV8 207 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 DCLK3Q9C098 648 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 ZBTB21Q9ULJ3 1066 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 PCDHGB4Q9UN71 923 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 PCDHGB5Q9Y5G0 923 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 UMODL1Q5DID0 1318 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
HERC6-202ENST00000273960 FOXD2O60548 495 aaPredicted RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 ZMPSTE24O75844 475 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 MSX2P35548 267 aaPredicted RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 ARSEP51690 589 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 UBAP2LQ14157 1087 aaKnown RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 SBK1Q52WX2 424 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 TCHHL1Q5QJ38 904 aaPredicted RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 DUS1LQ6P1R4 473 aaKnown RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 ARHGAP18Q8N392 663 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 CERS5Q8N5B7 392 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 SLC13A1Q9BZW2 595 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 ZNF212Q9UDV6 495 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 ZMYM2Q9UBW7 1377 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 E5RJQ4 531 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 ADRA2BP18089 450 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 GCAP28676 217 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 CBX3Q13185 183 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 BBS9Q3SYG4 887 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 CCDC174Q6PII3 467 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 SDCCAG8Q86SQ7 713 aaPredicted RBP13.49□□□□□ -0.25
HERC6-202ENST00000273960 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 NME8Q8N427 588 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
HERC6-202ENST00000273960 COMMD3-BMI1R4GMX3 469 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms