RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 CFAP221Q4G0U5 840 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 HDAC7Q8WUI4 952 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 RNF14Q9UBS8 474 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 TJP2Q9UDY2 1190 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 AFF1P51825 1210 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 VSNL1P62760 191 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 TWF2Q6IBS0 349 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 AADACL2Q6P093 401 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 TMEM176AQ96HP8 235 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 ADAM22Q9P0K1 906 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 FKTNO75072 461 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 NDST1P52848 882 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 TRAF7Q6Q0C0 670 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 VCPIP1Q96JH7 1222 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 PDCL3Q9H2J4 239 aa12.89□□□□□ -0.35
SDE2-201ENST00000272091 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
SDE2-201ENST00000272091 M0QZ92 97 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 LPIN1Q14693 890 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 CCDC181Q5TID7 509 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 RNF180Q86T96 592 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 PPP1R10Q96QC0 940 aaKnown RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 LRRC1Q9BTT6 524 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 PTCH2Q9Y6C5 1203 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 HCRTO43612 131 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 CEP104O60308 925 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 SEC31AO94979 1220 aaKnown RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 PTK7Q13308 1070 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 DAB2IPQ5VWQ8 1189 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 TRIM11Q96F44 468 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 ANAPC7Q9UJX3 599 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 CD52P31358 61 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 TNNC1P63316 161 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 TUBB4BP68371 445 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 DSC3Q14574 896 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 SOWAHAQ2M3V2 549 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 LIMS2Q7Z4I7 341 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 LPPQ93052 612 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 CTNNA2P26232 953 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 CTNNA1P35221 906 aaKnown RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 PTPN20Q4JDL3 420 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 KBTBD7Q8WVZ9 684 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 LHX5Q9H2C1 402 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 MIOSQ9NXC5 875 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 CACNG4Q9UBN1 327 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
SDE2-201ENST00000272091 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
SDE2-201ENST00000272091 SNX9Q9Y5X1 595 aa12.88□□□□□ -0.35
SDE2-201ENST00000272091 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
SDE2-201ENST00000272091 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 MICAL2O94851 1124 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 ZRANB2O95218 330 aaKnown RBP eCLIP12.87□□□□□ -0.35
SDE2-201ENST00000272091 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.356e-7■□□□□ 9.5
SDE2-201ENST00000272091 PADI3Q9ULW8 664 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 NR2E1Q9Y466 385 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 TSC2P49815 1807 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 O00370 1275 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 PFKMP08237 780 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 GHRP10912 638 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 FGFR1P11362 822 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 P4HA1P13674 534 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 CD19P15391 556 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 ATF7P17544 494 aaPredicted RBP12.87□□□□□ -0.35
SDE2-201ENST00000272091 YY1P25490 414 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 MYO1EQ12965 1108 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
SDE2-201ENST00000272091 WDR93Q6P2C0 686 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
SDE2-201ENST00000272091 CABYRO75952 493 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 ITGA4P13612 1032 aa12.87□□□□□ -0.35
SDE2-201ENST00000272091 GRK4P32298 578 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms