RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 SNX1Q13596 522 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 SLC10A6Q3KNW5 377 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 DNAJC21Q5F1R6 531 aaKnown RBP17.91■□□□□ 0.46
CHKA-201ENST00000265689 ZNF667Q5HYK9 610 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 CEP85LQ5SZL2 805 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 KIAA0319LQ8IZA0 1049 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 TMEM35BQ8NCS4 154 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHKA-201ENST00000265689 NFS1Q9Y697 457 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 TSPAN1O60635 241 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 LSM8O95777 96 aaKnown RBP17.91■□□□□ 0.46
CHKA-201ENST00000265689 SGO2Q562F6 1265 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 PPP1R2P3Q6NXS1 205 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 DENND1BQ6P3S1 775 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 C12orf50Q8NA57 414 aaPredicted RBP17.91■□□□□ 0.46
CHKA-201ENST00000265689 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.91■□□□□ 0.46
CHKA-201ENST00000265689 ATG4AQ8WYN0 398 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 SETD4Q9NVD3 440 aa17.91■□□□□ 0.46
CHKA-201ENST00000265689 MANSC4A6NHS7 340 aaPredicted RBP17.9■□□□□ 0.46
CHKA-201ENST00000265689 CD19P15391 556 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 DRG2P55039 364 aaKnown RBP17.9■□□□□ 0.46
CHKA-201ENST00000265689 LACTBP83111 547 aaPredicted RBP17.9■□□□□ 0.46
CHKA-201ENST00000265689 DGKDQ16760 1214 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 CYP4A22Q5TCH4 519 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 C17orf99Q6UX52 265 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 CXorf38Q8TB03 319 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 FBXO25Q8TCJ0 367 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 HEMGNQ9BXL5 484 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 LRRC19Q9H756 370 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 ATP8A1Q9Y2Q0 1164 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 PODXLO00592 558 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 HOXD8P13378 290 aaPredicted RBP17.9■□□□□ 0.46
CHKA-201ENST00000265689 TCF4P15884 667 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 TMEM62Q0P6H9 643 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 CCDC50Q8IVM0 306 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 RHOT1Q8IXI2 618 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 BCO2Q9BYV7 579 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 CHST7Q9NS84 486 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 PCDHGC3Q9UN70 934 aa17.9■□□□□ 0.46
CHKA-201ENST00000265689 TCRBV5S1A1TA0A578 114 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 TMEM191CA6NGB0 347 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 ERLIN2O94905 339 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 CALB1P05937 261 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 FNTAP49354 379 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 ZNF252P-AS1Q0IIN9 211 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 KIZQ2M2Z5 673 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 IQSEC1Q6DN90 963 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 LRIG3Q6UXM1 1119 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 MCEEQ96PE7 176 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 TXLNGYQ9BZA5 131 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 HMGXB4Q9UGU5 601 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 GINS2Q9Y248 185 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 DYNC1LI2O43237 492 aaPredicted RBP17.89■□□□□ 0.45
CHKA-201ENST00000265689 PSTPIP1O43586 416 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 RALAP11233 206 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 RAD23BP54727 409 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 YWHAEP62258 255 aaKnown RBP17.89■□□□□ 0.45
CHKA-201ENST00000265689 MTMR3Q13615 1198 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 ATP13A4Q4VNC1 1196 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 DNAJC24Q6P3W2 148 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 ANKS1BQ7Z6G8 1248 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 ERICH1Q86X53 443 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 TWNKQ96RR1 684 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 ASB7Q9H672 318 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 KLHL11Q9NVR0 708 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 IP6K2Q9UHH9 426 aa17.89■□□□□ 0.45
CHKA-201ENST00000265689 R3HDM2Q9Y2K5 976 aaKnown RBP17.89■□□□□ 0.45
CHKA-201ENST00000265689 SLC15A5A6NIM6 579 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 TMEM88BA6NKF7 163 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 PPFIA2O75334 1257 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 EIF4BP23588 611 aaKnown RBP17.88■□□□□ 0.45
CHKA-201ENST00000265689 POLR2BP30876 1174 aaKnown RBP17.88■□□□□ 0.45
CHKA-201ENST00000265689 CDH5P33151 784 aaPredicted RBP17.88■□□□□ 0.45
CHKA-201ENST00000265689 ACTN2P35609 894 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 HNRNPH2P55795 449 aaKnown RBP17.88■□□□□ 0.45
CHKA-201ENST00000265689 OGDHQ02218 1023 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 ZNF844Q08AG5 666 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 OLFML2BQ68BL8 750 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 ZNF518BQ9C0D4 1074 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 FAM49AQ9H0Q0 323 aaPredicted RBP17.88■□□□□ 0.45
CHKA-201ENST00000265689 TJP2Q9UDY2 1190 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 CYTH4Q9UIA0 394 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 GABRQQ9UN88 632 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 TRIP12Q14669 1992 aaPredicted RBP17.88■□□□□ 0.45
CHKA-201ENST00000265689 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 ECEL1O95672 775 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 TRIM32Q13049 653 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 TMEM132DQ14C87 1099 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 MORN1Q5T089 497 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 RUNDC3BQ96NL0 473 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 CENPHQ9H3R5 247 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 TMBIM4Q9HC24 238 aa17.88■□□□□ 0.45
CHKA-201ENST00000265689 F8VP50 259 aa17.87■□□□□ 0.45
CHKA-201ENST00000265689 DCUN1D2Q6PH85 259 aa17.87■□□□□ 0.45
CHKA-201ENST00000265689 KATNAL2Q8IYT4 538 aa17.87■□□□□ 0.45
CHKA-201ENST00000265689 SLC4A11Q8NBS3 891 aa17.87■□□□□ 0.45
CHKA-201ENST00000265689 RNF25Q96BH1 459 aaPredicted RBP17.87■□□□□ 0.45
CHKA-201ENST00000265689 ATP6V1G3Q96LB4 118 aa17.87■□□□□ 0.45
CHKA-201ENST00000265689 ACAP3Q96P50 834 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms