RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 ZBBXA8MT70 800 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 APOA1P02647 267 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 IRX1P78414 480 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 OCA2Q04671 838 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 GIT2Q14161 759 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 SPARCL1Q14515 664 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 RFX6Q8HWS3 928 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 RNPC3Q96LT9 517 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 AGO4Q9HCK5 861 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 KPNA7A9QM74 516 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 FAM163BP0C2L3 166 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 RFWD2Q8NHY2 731 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 CYTH2Q99418 400 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 UBAP1Q9NZ09 502 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ANO4Q32M45 955 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 DNAAF3Q8N9W5 541 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 C18orf8Q96DM3 657 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 MTMR8Q96EF0 704 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 NCANO14594 1321 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 ERI2A8K979 691 aaKnown RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TMCC1O94876 653 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 CALML6Q8TD86 181 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 ZBTB18Q99592 522 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 EPAS1Q99814 870 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PDE11AQ9HCR9 933 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TRPA1O75762 1119 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 HNRNPCP07910 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PYGMP11217 842 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 C7orf31Q8N865 590 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 USP38Q8NB14 1042 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 C10orf88Q9H8K7 445 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 CHCHD3Q9NX63 227 aaKnown RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 HOXB6P17509 224 aaKnown RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PMLP29590 882 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 INAQ16352 499 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TAF1BQ53T94 588 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 FBXO38Q6PIJ6 1188 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TMEM270Q6UE05 265 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 DCP1BQ8IZD4 617 aaKnown RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PXMP2Q9NR77 195 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TRIM33Q9UPN9 1127 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 CCDC78A2IDD5 438 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 SYCE1LA8MT33 242 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 VWA5AO00534 786 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PRR29P0C7W0 189 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 DPEP1P16444 411 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TEDDM1Q5T9Z0 273 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 MTHFD1LQ6UB35 978 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 KRT74Q7RTS7 529 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 ADGRA1Q86SQ6 560 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 ILDR1Q86SU0 546 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 SCN1AP35498 2009 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TAC1P20366 129 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 LRRC49Q8IUZ0 686 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 MTBPQ96DY7 904 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PDCD10Q9BUL8 212 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TTC7AQ9ULT0 858 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PCDHGC5Q9Y5F6 944 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 FDFT1P37268 417 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL6A5-201ENST00000265379 NCOA4Q13772 614 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PDK1Q15118 436 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 APPL2Q8NEU8 664 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 RNF139Q8WU17 664 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 NT5C1AQ9BXI3 368 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 DPH5Q9H2P9 285 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 TRPC7Q9HCX4 862 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 ZSCAN32Q9NX65 697 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 PAK5Q9P286 719 aa8.63□□□□□ -1.03
COL6A5-201ENST00000265379 BUB1O43683 1085 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 KRT6AP02538 564 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 KRT6BP04259 564 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 KRT6CP48668 564 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 PAPOLAP51003 745 aaKnown RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 HSD17B4P51659 736 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 RAVER2Q9HCJ3 691 aaKnown RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 RAB21Q9UL25 225 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 SHOC2Q9UQ13 582 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 BAZ2AQ9UIF9 1905 aaKnown RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 TXNP10599 105 aaKnown RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 ZNF280AP59817 542 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 SMARCB1Q12824 385 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 PTK2BQ14289 1009 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 LRRC41Q15345 812 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 KHDRBS2Q5VWX1 349 aaKnown RBP8.62□□□□□ -1.03
COL6A5-201ENST00000265379 OR9Q1Q8NGQ5 310 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 AFG1LQ8WV93 481 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 EFR3BQ9Y2G0 817 aa8.62□□□□□ -1.03
COL6A5-201ENST00000265379 OXCT1P55809 520 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms