RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZHX2Q9Y6X8 837 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 FOCADQ5VW36 1801 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ADRA1DP25100 572 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 PIK3CAP42336 1068 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 GTF2BQ00403 316 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 GCNT1Q02742 428 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 PDIA2Q13087 525 aaKnown RBP13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 CCDC174Q6PII3 467 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 RINLQ6ZS11 566 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ST13P4Q8IZP2 240 aaPredicted RBP13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 SEMA4DQ92854 862 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 OPTNQ96CV9 577 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 VCPIP1Q96JH7 1222 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 TMEM120AQ9BXJ8 343 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ATP5BP06576 529 aaKnown RBP13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 SERPINB3P29508 390 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 ENPEPQ07075 957 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 MCL1Q07820 350 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 CERKLQ49MI3 558 aaPredicted RBP13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 DNAL1Q4LDG9 190 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 TRIM42Q8IWZ5 723 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 BANPQ8N9N5 519 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 PHC3Q8NDX5 983 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 PLEKHO2Q8TD55 490 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 TCP10LQ8TDR4 215 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 ZNF577Q9BSK1 485 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 SPATA16Q9BXB7 569 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 KRT82Q9NSB4 513 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 XIRP1Q702N8 1843 aaKnown RBP13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 SMAPO00193 183 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 ARL4CP56559 192 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 OVGP1Q12889 678 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 DLGAP5Q15398 846 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 HIF1AQ16665 826 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 WDR72Q3MJ13 1102 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 RNASEH2BQ5TBB1 312 aaKnown RBP13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 CCNJLQ8IV13 435 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 NME8Q8N427 588 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 PYROXD1Q8WU10 500 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 WDR60Q8WVS4 1066 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 UNC45AQ9H3U1 944 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 PCDH9Q9HC56 1237 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 NDE1Q9NXR1 346 aa13.04□□□□□ -0.32
CHMP2B-201ENST00000263780 FKBP6O75344 327 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 PENKP01210 267 aaPredicted RBP13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 MT-ND3P03897 115 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 FGFR1P11362 822 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 ANPEPP15144 967 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 GTF2IP78347 998 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 TBCCQ15814 346 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 CEP55Q53EZ4 464 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 ZNF276Q8N554 614 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 OXNAD1Q96HP4 312 aaPredicted RBP13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 RIT2Q99578 217 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 ECSITQ9BQ95 431 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 DHRS4Q9BTZ2 278 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 BBOX1O75936 387 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 CRABP2P29373 138 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 CDK7P50613 346 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 MRRFQ96E11 262 aaKnown RBP13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 FAM161BQ96MY7 647 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 NDNQ99608 321 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 FAM118BQ9BPY3 351 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 ACSS3Q9H6R3 686 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 ZWILCHQ9H900 591 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 ATXN10Q9UBB4 475 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 IP6K2Q9UHH9 426 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 DNPEPQ9ULA0 475 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 TMCO1Q9UM00 188 aa13.03□□□□□ -0.32
CHMP2B-201ENST00000263780 IQANK1A0A1B0GTG1 560 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 B2RBV5 119 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 FCHO1O14526 889 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 CYP1A1P04798 512 aaPredicted RBP13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 ITGAVP06756 1048 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 DLDP09622 509 aaKnown RBP13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 UBTFL6P0CB48 400 aaPredicted RBP13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 SNAP25P60880 206 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 MAP7Q14244 749 aa13.02□□□□□ -0.32
CHMP2B-201ENST00000263780 PRKD1Q15139 912 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms