RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 NUDCD3Q8IVD9 361 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 XXYLT1Q8NBI6 393 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 ICA1LQ8NDH6 482 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 ECSITQ9BQ95 431 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 TCHPQ9BT92 498 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 KCNQ2O43526 872 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 ZNF189O75820 626 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 R3HDM1Q15032 1099 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 MARK2Q7KZI7 788 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 PDIK1LQ8N165 341 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 ZNF577Q9BSK1 485 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 AMNQ9BXJ7 453 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 PIK3R2O00459 728 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 VAV1P15498 845 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 SEPT12Q8IYM1 358 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 TRIML2Q8N7C3 387 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 FBXO36Q8NEA4 188 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 TAS1R2Q8TE23 839 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 PTPRN2Q92932 1015 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 OXNAD1Q96HP4 312 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 TRAPPC9Q96Q05 1148 aa16.73■□□□□ 0.27
PRPF40B-201ENST00000261897 EYA4O95677 639 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SPATA31D3P0C874 917 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SAT1P21673 171 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 CAV1Q03135 178 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 AP1B1Q10567 949 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 NCOA4Q13772 614 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 RBM44Q6ZP01 1051 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 ATXN7L3BQ96GX2 97 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 KLHL4Q9C0H6 718 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 HNRNPDLO14979 420 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 ITPK1Q13572 414 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 CNGA3Q16281 694 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SPOPLQ6IQ16 392 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 RAPH1Q70E73 1250 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SIKE1Q9BRV8 207 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 RIOX1Q9H6W3 641 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 GTF3C4Q9UKN8 822 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 DOLKQ9UPQ8 538 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 TMEM94Q12767 1356 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SPDYE16A6NNV3 312 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 MAGEB3O15480 346 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SPATA31C1P0DKV0 1188 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 MYCLP12524 364 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 SLC5A9Q2M3M2 681 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 ZC3H12AQ5D1E8 599 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 NXNQ6DKJ4 435 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 PADI6Q6TGC4 694 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 CRLF3Q8IUI8 442 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 ANKRD27Q96NW4 1050 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 PRPF18Q99633 342 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 LXNQ9BS40 222 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 HSPBP1Q9NZL4 362 aa16.72■□□□□ 0.27
PRPF40B-201ENST00000261897 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 WDR72Q3MJ13 1102 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 ATXN10Q9UBB4 475 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 FAM155BO75949 473 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 GEMIN4P57678 1058 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 XKR9Q5GH70 373 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 MROH9Q5TGP6 573 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 GDPD5Q8WTR4 605 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 DTNBP1Q96EV8 351 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 CTDP1Q9Y5B0 961 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 TRIM49D1C9J1S8 452 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 H7C0C1 242 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 CYB561D2O14569 222 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 RNASEH1O60930 286 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 CLPTM1O96005 669 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 ANXA13P27216 316 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 ATP5OP48047 213 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 SOX10P56693 466 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 CDC16Q13042 620 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 SCARA5Q6ZMJ2 495 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 DENND5BQ6ZUT9 1274 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 NAP1L4Q99733 375 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 FAM213AQ9BRX8 229 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 DCUN1D5Q9BTE7 237 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 TMEM109Q9BVC6 243 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 PHACTR1Q9C0D0 580 aa16.71■□□□□ 0.27
PRPF40B-201ENST00000261897 AKAP11Q9UKA4 1901 aa16.71■□□□□ 0.26
PRPF40B-201ENST00000261897 LMO7Q8WWI1 1683 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 ESYT2A0FGR8 921 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 C2CD2LO14523 706 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 TAS2R40P59535 323 aa16.7■□□□□ 0.26
PRPF40B-201ENST00000261897 RFX6Q8HWS3 928 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms