RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 DEPDC7Q96QD5 511 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 RPAP3Q9H6T3 665 aaPredicted RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 AKAP7Q9P0M2 348 aaPredicted RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 LEMD3Q9Y2U8 911 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 A8MXQ7 604 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PDE8BO95263 885 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 SERPINB5P36952 375 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 GALCP54803 685 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 KCNK10P57789 538 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 TAP1Q03518 808 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PHKG1Q16816 387 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PABPC3Q9H361 631 aaKnown RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 MBD2Q9UBB5 411 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 GCC2Q8IWJ2 1684 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PRPF4O43172 522 aaKnown RBP eCLIP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 CSTF3Q12996 717 aaKnown RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 TRMT5Q32P41 509 aaKnown RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 ZNF667Q5HYK9 610 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PCNX4Q63HM2 1172 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 TRIM72Q6ZMU5 477 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 ANKS3Q6ZW76 656 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 BBS7Q8IWZ6 715 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 ANKZF1Q9H8Y5 726 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 E2F8A0AVK6 867 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 RAD51Q06609 339 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 TBC1D19Q8N5T2 526 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 BTN2A2Q8WVV5 523 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 PGBD4Q96DM1 585 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 TMEM120AQ9BXJ8 343 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 UTYO14607 1347 aa11.22□□□□□ -0.61
SLC6A4-201ENST00000261707 UBA6A0AVT1 1052 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 SASH1O94885 1247 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 THRAP10827 490 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 SDC4P31431 198 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 SESN2P58004 480 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 RTL3Q8N8U3 475 aaKnown RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 OR6J1Q8NGC5 347 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 CEP44Q9C0F1 390 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 AIPL1Q9NZN9 384 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 CDH6P55285 790 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 SH3BP5LQ7L8J4 393 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 TRIM48Q8IWZ4 208 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 STK32AQ8WU08 396 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 DDX50Q9BQ39 737 aaKnown RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 CACNA2D2Q9NY47 1150 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 FAM50BQ9Y247 325 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 A0A1W2PQJ5 194 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 TRIM13O60858 407 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 SPAG6O75602 509 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 PCCAP05165 728 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 RALBP11234 206 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 ACTR2P61160 394 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 PFKFB3Q16875 520 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 C12orf60Q5U649 245 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 TAS2R42Q7RTR8 314 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 LRRC6Q86X45 466 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 ELMO2Q96JJ3 720 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 SPRTNQ9H040 489 aaPredicted RBP11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 CD209Q9NNX6 404 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
SLC6A4-201ENST00000261707 PNMA6FA0A0J9YX94 578 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 RARBP10826 455 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 RGS2P41220 211 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 CCT3P49368 545 aaKnown RBP11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 FUKQ8N0W3 1084 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 RMND5BQ96G75 393 aaPredicted RBP11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 MSRAQ9UJ68 235 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 PCDHB9Q9Y5E1 797 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 NEDD4P46934 1319 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 PZPP20742 1482 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 M0QYV0 167 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 ZNF862O60290 1169 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 MTTPP55157 894 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 ITGADQ13349 1161 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 TTLL4Q14679 1199 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 COBLL1Q53SF7 1204 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 OR6B3Q8NGW1 331 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 USP33Q8TEY7 942 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 ARHGEF26Q96DR7 871 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 FAM111AQ96PZ2 611 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 GREM2Q9H772 168 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 ZSCAN32Q9NX65 697 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 COPG2Q9UBF2 871 aa11.21□□□□□ -0.62
SLC6A4-201ENST00000261707 ACADMP11310 421 aa11.2□□□□□ -0.62
SLC6A4-201ENST00000261707 TCF3P15923 654 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms