RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 RNPC3Q96LT9 517 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ZCCHC2Q9C0B9 1178 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ECT2Q9H8V3 914 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NDUFA13Q9P0J0 144 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SLC24A2Q9UI40 661 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MAD2L2Q9UI95 211 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NDUFB9Q9Y6M9 179 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 POC1B-GALNT4F8VUJ3 575 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SLC9A3R1O14745 358 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NVLO15381 856 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 VIL1P09327 827 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TROAPQ12815 778 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RCN2Q14257 317 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 PTK2BQ14289 1009 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TDRD10Q5VZ19 366 aaKnown RBP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 NCLNQ969V3 563 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 UBXN6Q9BZV1 441 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 RAD21L1Q9H4I0 556 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 CYLDQ9NQC7 956 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 ZFATQ9P243 1243 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TRHDEQ9UKU6 1024 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 A8MXQ7 604 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GNGT2O14610 69 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 INPP1P49441 399 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TMPRSS15P98073 1019 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GRM3Q14832 879 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SLC9A9Q8IVB4 645 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 TRIM59Q8IWR1 403 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS13C-202ENST00000261517 SELENONQ9NZV5 590 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 GRID1Q9ULK0 1009 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 MYH2Q9UKX2 1941 aa4.52□□□□□ -1.69
VPS13C-202ENST00000261517 AP1G2O75843 785 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 PNMA6AP0CW24 399 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 AKR1B1P15121 316 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MRPS25P82663 173 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 BBS9Q3SYG4 887 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 WDR93Q6P2C0 686 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 PDZD8Q8NEN9 1154 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HSPH1Q92598 858 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ULK4Q96C45 1275 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 KCTD5Q9NXV2 234 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TRPM5Q9NZQ8 1165 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SHOC2Q9UQ13 582 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF510Q9Y2H8 683 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CAPN7Q9Y6W3 813 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 PRAMEF22A3QJZ6 481 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 KRT14P02533 472 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ATP6V1E1P36543 226 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ACTR2P61160 394 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CDR2Q01850 454 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 LRRC38Q5VT99 294 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 POTEGQ6S5H5 508 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 PARP9Q8IXQ6 854 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RNF149Q8NC42 400 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ASIC4Q96FT7 647 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CHMP6Q96FZ7 201 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TBC1D13Q9NVG8 400 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DNAAF2Q9NVR5 837 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CHCHD3Q9NX63 227 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TTC7AQ9ULT0 858 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 KPNA5O15131 536 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ABL1P00519 1130 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 IFNA14P01570 189 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HIST1H2AGP0C0S8 130 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HIST1H2ADP20671 130 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GPD1P21695 349 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 OCRLQ01968 901 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 LYPLAL1Q5VWZ2 237 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ACAD10Q6JQN1 1059 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MPZL3Q6UWV2 235 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 STAMQ92783 540 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CASP10Q92851 521 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HIST1H2AHQ96KK5 128 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GLT1D1Q96MS3 346 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HIST1H2AJQ99878 128 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 H2AFJQ9BTM1 129 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FTOQ9C0B1 505 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MMADHCQ9H3L0 296 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SAYSD1Q9NPB0 183 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TRIM66O15016 1216 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MAD2L1Q13257 205 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 IMPG1Q17R60 797 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF827Q17R98 1081 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CAPRIN2Q6IMN6 1127 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 UNC93AQ86WB7 457 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SEPT8Q92599 483 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 EPS8L2Q9H6S3 715 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 APPL1Q9UKG1 709 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 POTEMA6NI47 508 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TNFRSF8P28908 595 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RNASE9P60153 205 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DMTNQ08495 405 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 IRF5Q13568 498 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MMS22LQ6ZRQ5 1243 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DSG4Q86SJ6 1040 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RASSF3Q86WH2 238 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms