RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TRIM4Q9C037 500 aa16.78■□□□□ 0.28
LMNB1-201ENST00000261366 SMG5Q9UPR3 1016 aaKnown RBP16.78■□□□□ 0.28
LMNB1-201ENST00000261366 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.78■□□□□ 0.28
LMNB1-201ENST00000261366 SMAPO00193 183 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 DNALI1O14645 258 aaPredicted RBP16.77■□□□□ 0.28
LMNB1-201ENST00000261366 UNGP13051 313 aaPredicted RBP16.77■□□□□ 0.28
LMNB1-201ENST00000261366 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.28
LMNB1-201ENST00000261366 UGCGQ16739 394 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 FOXB2Q5VYV0 432 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 CWF19L1Q69YN2 538 aaKnown RBP16.77■□□□□ 0.28
LMNB1-201ENST00000261366 BBOF1Q8ND07 529 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 VCXQ9H320 206 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
LMNB1-201ENST00000261366 ANKFY1Q9P2R3 1169 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 KAT6AQ92794 2004 aa16.77■□□□□ 0.28
LMNB1-201ENST00000261366 DENND3A2RUS2 1198 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 GSC2O15499 205 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 PRPF4O43172 522 aaKnown RBP eCLIP16.77■□□□□ 0.274e-13■■■■■ 43.3
LMNB1-201ENST00000261366 TYROBPO43914 113 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 CACNA2D1P54289 1103 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 NRLP54845 237 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 SP4Q02446 784 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 CTC1Q2NKJ3 1217 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 SLC45A4Q5BKX6 768 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 XKR9Q5GH70 373 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 LRRC74BQ6ZQY2 392 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 CLPTM1LQ96KA5 538 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 KCNH7Q9NS40 1196 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 PSMC3IPQ9P2W1 217 aaPredicted RBP16.77■□□□□ 0.27
LMNB1-201ENST00000261366 MYPNQ86TC9 1320 aa16.77■□□□□ 0.27
LMNB1-201ENST00000261366 CCDC22O60826 627 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 MUTP22033 750 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 AMPD1P23109 780 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 SERPINB4P48594 390 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 NEK3P51956 506 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 ARFIP2P53365 341 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 SLC25A41Q8N5S1 370 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.76■□□□□ 0.27
LMNB1-201ENST00000261366 BICD1Q96G01 975 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 FAM161BQ96MY7 647 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 BTBD10Q9BSF8 475 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 C1orf112Q9NSG2 853 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 E7ENQ6 273 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 C2CD2LO14523 706 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 LIASO43766 372 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 BAG2O95816 211 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 ESRRAP11474 423 aaPredicted RBP16.76■□□□□ 0.27
LMNB1-201ENST00000261366 SPP2Q13103 211 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 MSS51Q4VC12 460 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 ANKRD22Q5VYY1 191 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 TMEM270Q6UE05 265 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 NLRX1Q86UT6 975 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 RHPN2Q8IUC4 686 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 FBXO27Q8NI29 283 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 MASTLQ96GX5 879 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 TMEM120AQ9BXJ8 343 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.76■□□□□ 0.273e-8■□□□□ 8.3
LMNB1-201ENST00000261366 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
LMNB1-201ENST00000261366 SKIP12755 728 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 YWHABP31946 246 aaKnown RBP16.75■□□□□ 0.27
LMNB1-201ENST00000261366 GPX6P59796 221 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 BBS9Q3SYG4 887 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 C3orf62Q6ZUJ4 267 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 RIBC1Q8N443 379 aaPredicted RBP16.75■□□□□ 0.27
LMNB1-201ENST00000261366 PYROXD1Q8WU10 500 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 MANSC1Q9H8J5 431 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 MARCOQ9UEW3 520 aaPredicted RBP16.75■□□□□ 0.27
LMNB1-201ENST00000261366 TCEAL9Q9UHQ7 104 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 PSMG1O95456 288 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 KITP10721 976 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 TNNI1P19237 187 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 BGNP21810 368 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 LRRC36Q1X8D7 754 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 SMTNL2Q2TAL5 461 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 CENPUQ71F23 418 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 ALYREFQ86V81 257 aaKnown RBP16.75■□□□□ 0.27
LMNB1-201ENST00000261366 FAM136AQ96C01 138 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 FGD4Q96M96 766 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 FAM111AQ96PZ2 611 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 PAFAH2Q99487 392 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 TTC1Q99614 292 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 TRIM55Q9BYV6 548 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 TAS2R1Q9NYW7 299 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 F8VP50 259 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
LMNB1-201ENST00000261366 NPTXRO95502 500 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 GLRA2P23416 452 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 SLC1A1P43005 524 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 GPC3P51654 580 aa16.75■□□□□ 0.27
LMNB1-201ENST00000261366 MAMLD1Q13495 774 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms