RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 MAP3K13O43283 966 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 DCTN3O75935 186 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 FAM155BO75949 473 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 MT-ND3P03897 115 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 ENO1P06733 434 aaKnown RBP17.77■□□□□ 0.44
SGPP1-201ENST00000247225 BGNP21810 368 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 ALDH1B1P30837 517 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 HIF1AQ16665 826 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 ANO5Q75V66 913 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 OGFOD1Q8N543 542 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 FAM71DQ8N9W8 422 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 RILPQ96NA2 401 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 PIK3CDO00329 1044 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
SGPP1-201ENST00000247225 CCNG2Q16589 344 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 CDO1Q16878 200 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 SLC39A4Q6P5W5 647 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 ASRGL1Q7L266 308 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 USP37Q86T82 979 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 CFAP61Q8NHU2 1237 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 CLPTM1LQ96KA5 538 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 TSC22D3Q99576 134 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 MECRQ9BV79 373 aa17.77■□□□□ 0.44
SGPP1-201ENST00000247225 AGO4Q9HCK5 861 aaKnown RBP17.77■□□□□ 0.44
SGPP1-201ENST00000247225 CLGNO14967 610 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 HAUS5O94927 633 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 NPR1P16066 1061 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 ARFIP2P53365 341 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 GDF10P55107 478 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 GTF2BQ00403 316 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 SGSM1Q2NKQ1 1148 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 MSS51Q4VC12 460 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 RNF43Q68DV7 783 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 FBXO36Q8NEA4 188 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 TJP2Q9UDY2 1190 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 NUMBLQ9Y6R0 609 aa17.77■□□□□ 0.43
SGPP1-201ENST00000247225 CST8O60676 142 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 TPBGLP0DKB5 382 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 T-ENOLP0DO92 83 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 MAN1A1P33908 653 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 PSMC5P62195 406 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 NR1H3Q13133 447 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 THOC5Q13769 683 aaKnown RBP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 OR5B17Q8NGF7 314 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 PTPRN2Q92932 1015 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 RIT2Q99578 217 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 POLR3FQ9H1D9 316 aaPredicted RBP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 CYP39A1Q9NYL5 469 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 PPARGC1AQ9UBK2 798 aaKnown RBP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 TNRC6CQ9HCJ0 1690 aaKnown RBP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 TCRBV7S3A2A0A539 114 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 SMNDC1O75940 238 aaKnown RBP eCLIP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 GNAT1P11488 350 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 ATP4AP20648 1035 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 HADHBP55084 474 aaKnown RBP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 TNFAIP8L3Q5GJ75 292 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 BSPRYQ5W0U4 402 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 PPM1NQ8N819 430 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 MASTLQ96GX5 879 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 BATF3Q9NR55 127 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.76■□□□□ 0.43
SGPP1-201ENST00000247225 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
SGPP1-201ENST00000247225 FAM237BA0A1B0GVD1 139 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 EDF1O60869 148 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 GRAP2O75791 330 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 TJP3O95049 919 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 MARK3P27448 753 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 TFAMQ00059 246 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 MKRN3Q13064 507 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 PRKG1Q13976 671 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 FNBP1LQ5T0N5 605 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 TDRD10Q5VZ19 366 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 ANO7Q6IWH7 933 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 RFX6Q8HWS3 928 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 AGGF1Q8N302 714 aaeCLIP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 FEZF2Q8TBJ5 459 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 ACTL9Q8TC94 416 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 SLC7A6OSQ96CW6 309 aaPredicted RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 PAFAH2Q99487 392 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 SMYD3Q9H7B4 428 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 MRPL47Q9HD33 250 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 RBAKQ9NYW8 714 aaPredicted RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 TMX2Q9Y320 296 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 PTPRJQ12913 1337 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 P4HA2O15460 535 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 SLC26A4O43511 780 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 LINGO3P0C6S8 592 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 CAV1Q03135 178 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 STRIP1Q5VSL9 837 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 AGO2Q9UKV8 859 aaKnown RBP17.75■□□□□ 0.43
SGPP1-201ENST00000247225 UBE4BO95155 1302 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 H3BRJ5 948 aa17.75■□□□□ 0.43
SGPP1-201ENST00000247225 DNALI1O14645 258 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms