RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 WNT8AQ9H1J5 351 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 PIH1D1Q9NWS0 290 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 SUGT1Q9Y2Z0 365 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 CCDC78A2IDD5 438 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 HNRNPCL1O60812 293 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 RNF8O76064 485 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 CCNE2O96020 404 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 RPL21P46778 160 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 PEX5P50542 639 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 NOP14P78316 857 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 CASC4Q6P4E1 433 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ZBED8Q8IZ13 594 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 THTPAQ9BU02 230 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 PAIP2BQ9ULR5 123 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ITGB4P16144 1822 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 B2RBV5 119 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ENTPD5O75356 428 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 GGPS1O95749 300 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 HLA-DRAP01903 254 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 TMEM253P0C7T8 217 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 CNGA2Q16280 664 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 WDR72Q3MJ13 1102 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 CCDC60Q8IWA6 550 aaPredicted RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ATP8B4Q8TF62 1192 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ATXN2LQ8WWM7 1075 aaKnown RBP12.14□□□□□ -0.47
SOX9-201ENST00000245479 MKL1Q969V6 931 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 MAGEB18Q96M61 343 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 CYP4F11Q9HBI6 524 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 ANLNQ9NQW6 1124 aa12.14□□□□□ -0.47
SOX9-201ENST00000245479 DNAH12Q6ZR08 3092 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 EME2A4GXA9 379 aaPredicted RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 RIPK2O43353 540 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 RARAP10276 462 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 ITIH2P19823 946 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 COILP38432 576 aaPredicted RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 ITGA8P53708 1063 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 NRLP54845 237 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 ASTE1Q2TB18 679 aaPredicted RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 TAF1BQ53T94 588 aaPredicted RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 C1orf131Q8NDD1 294 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 ELP3Q9H9T3 547 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 MYH7P12883 1935 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 GOLGA4Q13439 2230 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 TRAIPQ9BWF2 469 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 SLC9A2Q9UBY0 812 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 NDC80O14777 642 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 TBX3O15119 743 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 UNC5CO95185 931 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 CCND2P30279 289 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 RPS6KA3P51812 740 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 ACTR2P61160 394 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 GPS1Q13098 491 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 C6orf89Q6UWU4 347 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 MTDHQ86UE4 582 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 SCG3Q8WXD2 468 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 COPS5Q92905 334 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 MTBPQ96DY7 904 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 MTMR12Q9C0I1 747 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 C12orf65Q9H3J6 166 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 NGRNQ9NPE2 291 aaKnown RBP12.13□□□□□ -0.47
SOX9-201ENST00000245479 BCAP29Q9UHQ4 241 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
SOX9-201ENST00000245479 ROBO3Q96MS0 1386 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 H3BRJ5 948 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 TOM1L1O75674 476 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 MYCP01106 439 aaPredicted RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 SAT1P21673 171 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 PGM5Q15124 567 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 TATDN1Q6P1N9 297 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 ANO5Q75V66 913 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 RTKN2Q8IZC4 609 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 PLEKHO2Q8TD55 490 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 NSUN6Q8TEA1 469 aaKnown RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 SMG5Q9UPR3 1016 aaKnown RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 ICAM1P05362 532 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 ATP6V1C1P21283 382 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 CLCN3P51790 818 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms