RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 RAG1P15918 1043 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 HSPA6P17066 643 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 GNA11P29992 359 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 CDK16Q00536 496 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 LRRC63Q05C16 580 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 NR1H3Q13133 447 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ITGADQ13349 1161 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 FXNQ16595 210 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SPDYAQ5MJ70 313 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 RNF19BQ6ZMZ0 732 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 BPHLQ86WA6 291 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 FBXO27Q8NI29 283 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 PLEKHA8Q96JA3 519 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 UIMC1Q96RL1 719 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 NINJ2Q9NZG7 142 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 HACD3Q9P035 362 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SLAIN2Q9P270 581 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ZNF219Q9P2Y4 722 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 ADAMTS6Q9UKP5 1117 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SMG5Q9UPR3 1016 aaKnown RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 ATP11BQ9Y2G3 1177 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 MAGEB2O15479 319 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 CAMTA2O94983 1202 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ESRRBO95718 433 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 C6orf222P0C671 652 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 RBP3P10745 1247 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ATF2P15336 505 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 COILP38432 576 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 TRAPPC10P48553 1259 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 RAB15P59190 212 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 FKBP3Q00688 224 aaKnown RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 STAT4Q14765 748 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 PKN2Q16513 984 aaKnown RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 RGS21Q2M5E4 152 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 DCAF17Q5H9S7 520 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 IFIT1BQ5T764 474 aaKnown RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 CLVS1Q8IUQ0 354 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 SNX29Q8TEQ0 813 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 C1orf54Q8WWF1 131 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ALG3Q92685 438 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 NMUR2Q9GZQ4 415 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SNX25Q9H3E2 840 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SACM1LQ9NTJ5 587 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 DNAJB4Q9UDY4 337 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ANKRD34BA5PLL1 514 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 GOLGA8RI6L899 631 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 TBCAO75347 108 aaKnown RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 PLS3P13797 630 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 FOXO4P98177 505 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SF3B4Q15427 424 aaKnown RBP eCLIP10.25□□□□□ -0.773e-6■■■■■ 30.2
IRF1-201ENST00000245414 KCNJ8Q15842 424 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ARSHQ5FYA8 562 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 PLEKHA7Q6IQ23 1121 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 NIPAL1Q6NVV3 410 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 MIGA1Q8NAN2 632 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 OXNAD1Q96HP4 312 aaPredicted RBP10.25□□□□□ -0.77
IRF1-201ENST00000245414 ZNF287Q9HBT7 754 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 GPAMQ9HCL2 828 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 ZDHHC7Q9NXF8 308 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 FMN2Q9NZ56 1722 aa10.25□□□□□ -0.77
IRF1-201ENST00000245414 A6NL46 340 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 J3QRK9 145 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 GIPC1O14908 333 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 DDX5P17844 614 aaKnown RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 NR4A1P22736 598 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 ADRA1DP25100 572 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 ITGA8P53708 1063 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 ESRRGP62508 458 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 TUBA1BP68363 451 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 RALGDSQ12967 914 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 E2F2Q14209 437 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 PDK1Q15118 436 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 TUBA1AQ71U36 451 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 PRPF39Q86UA1 669 aaKnown RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 ALYREFQ86V81 257 aaKnown RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 GLYCTKQ8IVS8 523 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 IFNL3Q8IZI9 196 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 TTC39CQ8N584 583 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 IP6K1Q92551 441 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 FBXL8Q96CD0 374 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 CAAP1Q9H8G2 361 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 TYW1Q9NV66 732 aaKnown RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 GRID1Q9ULK0 1009 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 AP4B1Q9Y6B7 739 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 ZMYM2Q9UBW7 1377 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 PIK3C2AO00443 1686 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 A8MU76 341 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 FBXO21O94952 628 aa10.24□□□□□ -0.77
IRF1-201ENST00000245414 DLATP10515 647 aaKnown RBP10.24□□□□□ -0.77
IRF1-201ENST00000245414 SLC9A1P19634 815 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms