RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PTPAQ15257 358 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 TRADDQ15628 312 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 C1orf131Q8NDD1 294 aaKnown RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 INPP5DQ92835 1189 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 TRPC7Q9HCX4 862 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 PCDHGB4Q9UN71 923 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 A0A087X0T9 212 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 KIAA0391O15091 583 aaKnown RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 DAB1O75553 588 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 FAM228BP0C875 321 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 MRPS15P82914 257 aaKnown RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 DNAJC7Q99615 494 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 KDM4CQ9H3R0 1056 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 BATF3Q9NR55 127 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 H3BQF6 201 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 MAP3K6O95382 1288 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 CSF1RP07333 972 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ATP6V1B1P15313 513 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SERPINB3P29508 390 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ATP6V1E1P36543 226 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 BLVRAP53004 296 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 CD274Q9NZQ7 290 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 H0Y626 953 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 TRIM16O95361 564 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 CASP4P49662 377 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SLC13A5Q86YT5 568 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 TEKT4Q8WW24 435 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 CCT7Q99832 543 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 EXTL3O43909 919 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 NNMTP40261 264 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SERPINB10P48595 397 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 TRIM28Q13263 835 aaKnown RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 COL23A1Q86Y22 540 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 ZNF512BQ96KM6 892 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 MXRA8Q9BRK3 442 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 CEP152O94986 1710 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 POLBP06746 335 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SPRP35270 261 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 RCN1Q15293 331 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 IL31Q6EBC2 164 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ACAD10Q6JQN1 1059 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 RRM2BQ7LG56 351 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ARID3BQ8IVW6 561 aaPredicted RBP13.97□□□□□ -0.17
NEK4-201ENST00000233027 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 MYCBPAPQ8TBZ2 947 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ZSWIM1Q9BR11 485 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 CCDC134Q9H6E4 229 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 TMBIM4Q9HC24 238 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 KCND2Q9NZV8 630 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SLC39A10Q9ULF5 831 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 TRIM49D1C9J1S8 452 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 CTSHP09668 335 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 IRF1P10914 325 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 ETFBP38117 255 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 DCAF6Q58WW2 860 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 TTC23LQ6PF05 361 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 POTEAQ6S8J7 498 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SCFD1Q8WVM8 642 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 MED15Q96RN5 788 aa13.97□□□□□ -0.17
NEK4-201ENST00000233027 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.97□□□□□ -0.17
NEK4-201ENST00000233027 APOA1P02647 267 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 SERPIND1P05546 499 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 RBP3P10745 1247 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 RPA1P27694 616 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 NPEPPSP55786 919 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 LRRC74AQ0VAA2 488 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 ARHGEF6Q15052 776 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 ATF7IP2Q5U623 682 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.17
NEK4-201ENST00000233027 TSPAN17Q96FV3 270 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 VPS50Q96JG6 964 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 GRID1Q9ULK0 1009 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 NUDT2P50583 147 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 AGBL1Q96MI9 1066 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 L2HGDHQ9H9P8 463 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 RSAD1Q9HA92 442 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 NDUFS3O75489 264 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 NQO1P15559 274 aaKnown RBP13.96□□□□□ -0.17
NEK4-201ENST00000233027 VHLP40337 213 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 TRIM60Q495X7 471 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 SPDYE7PQ495Y7 208 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 SGO1Q5FBB7 561 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 ZNF34Q8IZ26 560 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 EFHBQ8N7U6 833 aa13.96□□□□□ -0.17
NEK4-201ENST00000233027 MAPK7Q13164 816 aa13.96□□□□□ -0.18
NEK4-201ENST00000233027 SGF29Q96ES7 293 aa13.96□□□□□ -0.18
NEK4-201ENST00000233027 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.18
NEK4-201ENST00000233027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.18
NEK4-201ENST00000233027 HEY2Q9UBP5 337 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms