RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OSTM1Q86WC4 334 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
LSM5-201ENST00000223084 NECTIN4Q96NY8 510 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 TSG101Q99816 390 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 GTPBP4Q9BZE4 634 aaKnown RBP13.63□□□□□ -0.23
LSM5-201ENST00000223084 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 PIDD1Q9HB75 910 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 CYP4F11Q9HBI6 524 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 GDAP2Q9NXN4 497 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 KIAA1468Q9P260 1216 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 AFF4Q9UHB7 1163 aaKnown RBP13.63□□□□□ -0.23
LSM5-201ENST00000223084 POLIQ9UNA4 740 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 LOC730098B7Z3J9 87 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 PSMA7O14818 248 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 CETN3O15182 167 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 MAPK13O15264 365 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 HUS1O60921 280 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 PAPLNO95428 1278 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 VNN1O95497 513 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
LSM5-201ENST00000223084 CCNE1P24864 410 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 STX17P56962 302 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 GPR17Q13304 367 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 STIM1Q13586 685 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 SOWAHAQ2M3V2 549 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 SLC39A12Q504Y0 691 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 TPGS2Q68CL5 300 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 CCDC149Q6ZUS6 474 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 GRASPQ7Z6J2 395 aaPredicted RBP13.62□□□□□ -0.23
LSM5-201ENST00000223084 LRRTM3Q86VH5 581 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 THEM5Q8N1Q8 247 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 TTC9BQ8N6N2 239 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 ATAD1Q8NBU5 361 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 NELFBQ8WX92 580 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 DHTKD1Q96HY7 919 aaPredicted RBP13.62□□□□□ -0.23
LSM5-201ENST00000223084 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
LSM5-201ENST00000223084 ZCWPW1Q9H0M4 648 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 CRISPLD1Q9H336 500 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
LSM5-201ENST00000223084 HCFC1R1Q9NWW0 138 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
LSM5-201ENST00000223084 NOTCH4Q99466 2003 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 DOCK8Q8NF50 2099 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 MTMR11A4FU01 709 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 C2CD4DB7Z1M9 353 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 HNRNPA1P09651 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
LSM5-201ENST00000223084 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
LSM5-201ENST00000223084 KRT13P13646 458 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 HOXA9P31269 272 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 GCLMP48507 274 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 AP3M2P53677 418 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
LSM5-201ENST00000223084 PPP3CAQ08209 521 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 DUSP4Q13115 394 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 NCOA4Q13772 614 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 ZACNQ401N2 412 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 INTS8Q75QN2 995 aaKnown RBP13.61□□□□□ -0.23
LSM5-201ENST00000223084 SV2AQ7L0J3 742 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 LIMS2Q7Z4I7 341 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 ZC3H3Q8IXZ2 948 aaKnown RBP13.61□□□□□ -0.23
LSM5-201ENST00000223084 TCEAL8Q8IYN2 117 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 ADGRF2Q8IZF7 708 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 TOP6BLQ8N6T0 577 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 KBTBD7Q8WVZ9 684 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 MMS19Q96T76 1030 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 DUSP9Q99956 384 aaKnown RBP13.61□□□□□ -0.23
LSM5-201ENST00000223084 RHOBTB2Q9BYZ6 727 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 XYLT2Q9H1B5 865 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.23
LSM5-201ENST00000223084 TMLHEQ9NVH6 421 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 DDX43Q9NXZ2 648 aaKnown RBP13.61□□□□□ -0.23
LSM5-201ENST00000223084 SLC27A5Q9Y2P5 690 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 INSL5Q9Y5Q6 135 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 BDP1A6H8Y1 2624 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 DENND4AQ7Z401 1863 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 CLUHO75153 1309 aa13.61□□□□□ -0.23
LSM5-201ENST00000223084 IKBKBO14920 756 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 N4BP1O75113 896 aaKnown RBP13.6□□□□□ -0.23
LSM5-201ENST00000223084 XYLBO75191 536 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 SOAT2O75908 522 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 CLSTN1O94985 981 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 LRG1P02750 347 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 LRRC63Q05C16 580 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 TWF1Q12792 350 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 WDR72Q3MJ13 1102 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 TTI2Q6NXR4 508 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 CYP26C1Q6V0L0 522 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 RNF135Q8IUD6 432 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 TMEM86AQ8N2M4 240 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 SYAP1Q96A49 352 aaPredicted RBP13.6□□□□□ -0.23
LSM5-201ENST00000223084 MRPL45Q9BRJ2 306 aaKnown RBP13.6□□□□□ -0.23
LSM5-201ENST00000223084 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
LSM5-201ENST00000223084 DNMT3BQ9UBC3 853 aaKnown RBP13.6□□□□□ -0.23
LSM5-201ENST00000223084 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms