RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ENTPD3O75355 529 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 SGSM3Q96HU1 749 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 PCDHB2Q9Y5E7 798 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 FXR2P51116 673 aaKnown RBP eCLIP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 RAP1GDS1P52306 607 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 MGAT5BQ3V5L5 792 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 BTNL9Q6UXG8 535 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 PRPF39Q86UA1 669 aaKnown RBP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 LATS2Q9NRM7 1088 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 RNF17Q9BXT8 1623 aaKnown RBP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 CAMTA2O94983 1202 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 SERPINB10P48595 397 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 SNAPC2Q13487 334 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 DDX42Q86XP3 938 aaKnown RBP eCLIP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 FEZF2Q8TBJ5 459 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 CYFIP2Q96F07 1278 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 ZMAT2Q96NC0 199 aaKnown RBP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 ZC4H2Q9NQZ6 224 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 MTO1Q9Y2Z2 717 aaKnown RBP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 MAGEB2O15479 319 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 VCAM1P19320 739 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 STAMBPL1Q96FJ0 436 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 MANSC1Q9H8J5 431 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 IGSF9BQ9UPX0 1349 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 H0Y626 953 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 KLHL2O95198 593 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 TRIM16O95361 564 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 ARHGEF7Q14155 803 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 HHIPL2Q6UWX4 724 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 AGBL1Q96MI9 1066 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 SLC38A7Q9NVC3 462 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 IQCA1LA6NCM1 817 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 KBTBD13C9JR72 458 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 CST8O60676 142 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 ZNF512Q96ME7 567 aaPredicted RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 IL1RL2Q9HB29 575 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 PPP1R3GB7ZBB8 358 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 SNRPAP09012 282 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 FAM32AQ9Y421 112 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 ALG6Q9Y672 507 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 PRRG1O14668 218 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 COILP38432 576 aaPredicted RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 CARSP49589 748 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 SNRPFP62306 86 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 CHI3L2Q15782 390 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 KYNUQ16719 465 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 ZNF677Q86XU0 584 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 GALNT4Q8N4A0 578 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 EME1Q96AY2 570 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 ISCUQ9H1K1 167 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 GOLPH3Q9H4A6 298 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 PPCSQ9HAB8 311 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 UBE3AQ05086 875 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 PRAMEF18Q5VWM3 479 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 PTRHD1Q6GMV3 140 aaKnown RBP18.65■□□□□ 0.58
EXTL3-201ENST00000220562 APOL5Q9BWW9 433 aa18.65■□□□□ 0.58
EXTL3-201ENST00000220562 KCNJ1P48048 391 aa18.64■□□□□ 0.58
EXTL3-201ENST00000220562 TWF1Q12792 350 aa18.64■□□□□ 0.58
EXTL3-201ENST00000220562 TAF1CQ15572 869 aaPredicted RBP18.64■□□□□ 0.58
EXTL3-201ENST00000220562 TJAP1Q5JTD0 557 aa18.64■□□□□ 0.58
EXTL3-201ENST00000220562 ANGEL2Q5VTE6 544 aaKnown RBP18.64■□□□□ 0.58
EXTL3-201ENST00000220562 TRPM8Q7Z2W7 1104 aa18.64■□□□□ 0.58
EXTL3-201ENST00000220562 IFNEQ86WN2 208 aa18.64■□□□□ 0.58
EXTL3-201ENST00000220562 STKLD1Q8NE28 680 aa18.64■□□□□ 0.58
EXTL3-201ENST00000220562 ROPN1BQ9BZX4 212 aaPredicted RBP18.64■□□□□ 0.58
EXTL3-201ENST00000220562 ROPN1Q9HAT0 212 aaPredicted RBP18.64■□□□□ 0.58
EXTL3-201ENST00000220562 FKBP9O95302 570 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 FKBP9P1Q75LS8 142 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 PPIL6Q8IXY8 311 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 TMCO5AQ8N6Q1 288 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 ZNF556Q9HAH1 456 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 SRLQ86TD4 932 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 CMTM5Q96DZ9 223 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 PPP1R2P1Q96PQ5 205 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 KCNK16Q96T55 309 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 CTDNEP1O95476 244 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 CSF1RP07333 972 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 ZRANB3Q5FWF4 1079 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 PLD3Q8IV08 490 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 KIF2BQ8N4N8 673 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 CALML6Q8TD86 181 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 NCAM1P13591 858 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 FDPSP14324 419 aaKnown RBP18.64■□□□□ 0.57
EXTL3-201ENST00000220562 SKIV2LQ15477 1246 aaKnown RBP18.64■□□□□ 0.57
EXTL3-201ENST00000220562 NIF3L1Q9GZT8 377 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 SH3BP1Q9Y3L3 701 aa18.64■□□□□ 0.57
EXTL3-201ENST00000220562 SPAG6O75602 509 aa18.63■□□□□ 0.57
EXTL3-201ENST00000220562 SGO1Q5FBB7 561 aa18.63■□□□□ 0.57
EXTL3-201ENST00000220562 HPDLQ96IR7 371 aa18.63■□□□□ 0.57
EXTL3-201ENST00000220562 KCNH7Q9NS40 1196 aa18.63■□□□□ 0.57
EXTL3-201ENST00000220562 ADGRB3O60242 1522 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms