RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 INO80Q9ULG1 1556 aaPredicted RBP19.72■□□□□ 0.75
MBD3-201ENST00000156825 PCSK1P29120 753 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 RAP1GAPP47736 663 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 PTK7Q13308 1070 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 LRRC8EQ6NSJ5 796 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TASP1Q9H6P5 420 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 GPATCH2LQ9NWQ4 482 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 HPSEQ9Y251 543 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 PMS1P54277 932 aaKnown RBP19.72■□□□□ 0.75
MBD3-201ENST00000156825 LRRC36Q1X8D7 754 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 C9orf131Q5VYM1 1079 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TRIM54Q9BYV2 358 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TMX2Q9Y320 296 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 AGTP01019 485 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 MROH9Q5TGP6 573 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 CHSY1Q86X52 802 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 MDM1Q8TC05 714 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 DDIT4Q9NX09 232 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 AKT1P31749 480 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 SCFD1Q8WVM8 642 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 TRIM15Q9C019 465 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 ARHGEF38Q9NXL2 777 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 PFDN1O60925 122 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 ATP5HO75947 161 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 PDAP1Q13442 181 aaKnown RBP19.71■□□□□ 0.75
MBD3-201ENST00000156825 C10orf120Q5SQS8 335 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 IFNEQ86WN2 208 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 ABTB1Q969K4 478 aaPredicted RBP19.71■□□□□ 0.75
MBD3-201ENST00000156825 SGF29Q96ES7 293 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 CYBBP04839 570 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 C6orf10Q5SRN2 563 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 OSGEPQ9NPF4 335 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 STOML1Q9UBI4 398 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 TCRBV5S4A2TA0A5A2 114 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 TMEM120BA0PK00 339 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 OGTO15294 1046 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 PMPCBO75439 489 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 DDNO94850 711 aaPredicted RBP19.71■□□□□ 0.75
MBD3-201ENST00000156825 SERPIND1P05546 499 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 TAF6P49848 677 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 MIB1Q86YT6 1006 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 KCNB2Q92953 911 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 TSSK1BQ9BXA7 367 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 DDX4Q9NQI0 724 aaKnown RBP19.71■□□□□ 0.75
MBD3-201ENST00000156825 THEGQ9P2T0 379 aa19.71■□□□□ 0.75
MBD3-201ENST00000156825 FAM200BP0CF97 657 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 KRT4P19013 534 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 RPAINQ86UA6 219 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 FAM96AQ9H5X1 160 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 COG4Q9H9E3 785 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 RSAD1Q9HA92 442 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 AURKCQ9UQB9 309 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 M0QYT0 321 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 RAD23BP54727 409 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 CSE1LP55060 971 aaKnown RBP19.7■□□□□ 0.74
MBD3-201ENST00000156825 GLT1D1Q96MS3 346 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 PXDNQ92626 1479 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 SPDYAQ5MJ70 313 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 ACAD10Q6JQN1 1059 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 ZNF669Q96BR6 464 aaPredicted RBP19.7■□□□□ 0.74
MBD3-201ENST00000156825 WWP1Q9H0M0 922 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 SLC38A7Q9NVC3 462 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 PSMC3IPQ9P2W1 217 aaPredicted RBP19.7■□□□□ 0.74
MBD3-201ENST00000156825 CPA4Q9UI42 421 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 SHMT1P34896 483 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 XRRA1Q6P2D8 792 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 DCUN1D1Q96GG9 259 aa19.7■□□□□ 0.74
MBD3-201ENST00000156825 NDUFS3O75489 264 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 EEF1DP29692 281 aaKnown RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 COILP38432 576 aaPredicted RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 STX3Q13277 289 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 NUP93Q8N1F7 819 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 SYTL5Q8TDW5 730 aaPredicted RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 SLC20A1Q8WUM9 679 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 SUPT20HL2P0C7V6 817 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 PGM1P36871 562 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 ZFPM1Q8IX07 1006 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 EMC1Q8N766 993 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 ZNF473Q8WTR7 871 aaKnown RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 PDCD2LQ9BRP1 358 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 GTF3C4Q9UKN8 822 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 MTHFD1LQ6UB35 978 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 SYDE1Q6ZW31 735 aaPredicted RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 SLC13A5Q86YT5 568 aaPredicted RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 TMA16Q96EY4 203 aaKnown RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.69■□□□□ 0.74
MBD3-201ENST00000156825 AP5Z1O43299 807 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 AARSP49588 968 aaKnown RBP eCLIP19.69■□□□□ 0.74
MBD3-201ENST00000156825 ST13P4Q8IZP2 240 aaPredicted RBP19.69■□□□□ 0.74
MBD3-201ENST00000156825 PNKPQ96T60 521 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 SLC30A1Q9Y6M5 507 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 AK9Q5TCS8 1911 aa19.69■□□□□ 0.74
MBD3-201ENST00000156825 ZBTB39O15060 712 aa19.68■□□□□ 0.74
MBD3-201ENST00000156825 CHUKO15111 745 aa19.68■□□□□ 0.74
MBD3-201ENST00000156825 P4HA2O15460 535 aa19.68■□□□□ 0.74
MBD3-201ENST00000156825 ENO3P13929 434 aaPredicted RBP19.68■□□□□ 0.74
MBD3-201ENST00000156825 LSM7Q9UK45 103 aaKnown RBP19.68■□□□□ 0.74
MBD3-201ENST00000156825 PRPF4O43172 522 aaKnown RBP eCLIP19.68■□□□□ 0.744e-7■■■■□ 20.3
MBD3-201ENST00000156825 RRM1P23921 792 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms