RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 4933428M09RikQ9D3X3 192 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gkap1Q9JMB0 366 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rhox3fA2ANE1 215 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Supt3B0QZW4 406 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Arhgap42B2RQE8 841 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Atf2P16951 487 aaKnown RBP16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Dpep1P31428 410 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 9130409I23RikQ3TS87 320 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Acbd5Q5XG73 508 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Myo6Q64331 1265 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Podnl1Q6P3Y9 559 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Psmd5Q8BJY1 504 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Psmd6Q99JI4 389 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Mxra7Q9CZH7 178 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Llcfc1Q9D9P8 108 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rasgrp1Q9Z1S3 795 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Speer3W4VSP1 261 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Cep290Q6A078 2472 aa16.16■□□□□ 0.18
Upf1-202ENSMUST00000215817 Xpnpep1Q6P1B1 623 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 PdhxQ8BKZ9 501 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 NemfQ8CCP0 1064 aaKnown RBP16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ccdc17Q8CE13 565 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Smtnl2Q8CI12 456 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 EtfbQ9DCW4 255 aaKnown RBP16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Btaf1E9QAE3 1848 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rad51ap2G3UW63 976 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 S100bP50114 92 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Mxi1P50540 228 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Esyt3Q5DTI8 891 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tas2r115Q7M719 310 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Sgms1Q8VCQ6 419 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ddx56Q9D0R4 546 aaKnown RBP16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Mtcl1Q3UHU5 1945 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gm5689F6Y2A6 97 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gjd2O54851 321 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rtel1Q0VGM9 1203 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Trmt10cQ3UFY8 414 aaKnown RBP16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Slc26a2Q62273 739 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Atg9bQ6EBV9 922 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Kcnf1Q7TSH7 493 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Drd5Q8BLD9 478 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Sbk1Q8QZX0 417 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Kif12Q9D2Z8 642 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gm36028A0A0U1RPM1 299 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Osbpl7A2A716 963 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Clk2O35491 499 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Cyp2b9P12790 491 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tff2Q03404 129 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gm10488Q4KL05 212 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ehbp1Q69ZW3 1231 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Slitrk1Q810C1 696 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ccdc87Q8CDL9 855 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Krt27Q9Z320 448 aa16.15■□□□□ 0.18
Upf1-202ENSMUST00000215817 Arap2Q8BZ05 1703 aa16.14■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gucy2dA0A0U1RPR8 1117 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm8369E9PZI3 166 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ptpn11P35235 597 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 ClgnP52194 611 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Foxred2Q3USW5 665 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Olfr698Q7TRN4 311 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Prr33Q8C494 260 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Zdhhc3Q8R173 299 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tesk2Q8VCT9 570 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Trim60Q8VI40 466 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tacc3Q9JJ11 631 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Klra17Q9JMA4 273 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Kiaa0100Q5SYL3 2234 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rab20P35295 233 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rnf157Q3TEL6 685 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Adck2Q6NSR3 617 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Slc51bQ80WK2 128 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Impg2Q80XH2 1243 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gtpbp10Q8K013 366 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Map1bP14873 2464 aaKnown RBP16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Itgb7P26011 806 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Dpf3P58269 378 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Arl1P61211 181 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cdr2P97817 455 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Grm2Q14BI2 872 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Srebf2Q3U1N2 1130 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ccdc97Q9DBT3 340 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Trpm5Q9JJH7 1158 aa16.14■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm3182K7N6T8 263 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Acot1O55137 419 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gnat1P20612 350 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Wdr41Q3UDP0 460 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Serpinb1cQ5SV42 375 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Vav2Q60992 868 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ncoa7Q6DFV7 943 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nek5Q7TSC3 627 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Slc13a3Q91Y63 600 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Chordc1Q9D1P4 331 aaKnown RBP16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Pth1rP41593 591 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Osbpl1aQ91XL9 950 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Pbxip1Q3TVI8 727 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 TchpQ3TVW5 497 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Dclk2Q6PGN3 756 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 SgczQ8BX51 311 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Mob2Q8VI63 235 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Syt5Q9R0N5 386 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms