RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Atl2Q6PA06 583 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Celf6Q7TN33 460 aaKnown RBP13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Mrgprb8Q7TN51 330 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Aldh5a1Q8BWF0 523 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ugt3a2Q8JZZ0 523 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Kct2Q8K201 259 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Twf1Q91YR1 350 aaKnown RBP13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ngly1Q9JI78 651 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 SufuQ9Z0P7 484 aa13.92□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gm4985A2ALC6 410 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Apol8A2VDH7 339 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 MtrA6H5Y3 1253 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Sept7O55131 436 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Usp10P52479 792 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 CstaP56567 97 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Acsbg2Q2XU92 667 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 GsapQ3TCV3 858 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Hace1Q3U0D9 909 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Sh3gl2Q62420 352 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Armcx2Q6A058 784 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Garem2Q6PAJ3 880 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Znf507Q6ZPY5 941 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gpr151Q7TSN6 422 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Vmn2r43Q80Z08 845 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ccdc50Q810U5 305 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cog3Q8CI04 820 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Orc3Q9JK30 715 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rnf4Q9QZS2 194 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 2010300C02RikE9Q3M9 1175 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Vmn2r15L7N2A0 855 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ccnd3P30282 292 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Stkld1Q80YS9 662 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tdp1Q8BJ37 609 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Dpp9Q8BVG4 862 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Slf1Q8R3P9 1054 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Wbp11Q923D5 641 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rilpl2Q99LE1 197 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Nsmce3Q9CPR8 279 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gpihbp1Q9D1N2 228 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Scgb2b12S4R2L0 112 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 TazI7HJS2 263 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Hspa9P38647 679 aaKnown RBP13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Mxi1P50540 228 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Acvrl1Q61288 502 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Spata20Q80YT5 790 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Nipa1Q8BHK1 323 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Sept10Q8C650 452 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Mill1Q8HWE7 395 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 D630039A03RikQ8K0M7 236 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Trpv6Q91WD2 767 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ubr2Q6WKZ8 1755 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cntnap2Q9CPW0 1332 aa13.91□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gm28360A0A087WR25 190 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tex11Q14AT2 947 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Sema5bQ60519 1093 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Six2Q62232 296 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Arhgap24Q8C4V1 747 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Psip1Q99JF8 528 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Psmd9Q9CR00 222 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 PmpcbQ9CXT8 489 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cep72Q9D3R3 646 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gm6588E9Q3K0 461 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Cd70O55237 195 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 NxnP97346 435 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 OsbpQ3B7Z2 805 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ogfod1Q3U0K8 545 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Foxred2Q3USW5 665 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Srrm1Q52KI8 946 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Moxd2Q7TT41 619 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Atp2a1Q8R429 994 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Tbc1d19Q8VDV7 526 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 St13Q99L47 371 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Map3k20Q9ESL4 802 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Duox1A2AQ92 1551 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gm3424L7N298 263 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Gm8246M0QWX9 263 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Pon1P52430 355 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 SnrpfP62307 86 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Pja2Q80U04 707 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Trerf1Q8BXJ2 1205 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Ythdf3Q8BYK6 585 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Prr33Q8C494 260 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Plcb4Q91UZ1 1175 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Pidd1Q9ERV7 915 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Noc2lQ9WV70 747 aaKnown RBP13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Serpinb6cW4VSP4 379 aa13.9□□□□□ -0.18
Pdgfra-205ENSMUST00000201711 Rag1P15919 1040 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 NrlP54846 237 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Arl1P61211 181 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Lrch1P62046 709 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Pla2g6P97819 807 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Tbc1d22aQ8R5A6 516 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Dnajc28Q8VCE1 385 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Plekhh3Q8VCE9 796 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Tbx20Q9ES03 445 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Dach1Q9QYB2 751 aa13.9□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Bpifb9bA2AJD1 591 aa13.89□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Fam71aB7XG49 585 aa13.89□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 Rfx8D3YU81 596 aa13.89□□□□□ -0.19
Pdgfra-205ENSMUST00000201711 R3hdm1E9Q9Q2 1135 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms