RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Cd44P15379 778 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fhod1Q6P9Q4 1197 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Celf6Q7TN33 460 aaKnown RBP16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Nsun6Q7TS68 476 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Nim1kQ8BHI9 436 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Jag1Q9QXX0 1218 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Phlpp1Q8CHE4 1687 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gcnt4E9Q649 455 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Grm1P97772 1199 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Foxred2Q3USW5 665 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Spag6Q3V0U9 509 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 StilQ60988 1262 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Unc45bQ8CGY6 931 aaKnown RBP16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fgfr1op2Q9CRA9 253 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Micu3Q9CTY5 523 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 AllcQ9JHX6 414 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mcf2A2AEU1 1111 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Alox15P39654 663 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Muc3aQ3U5A2 218 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 ThrspQ62264 150 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Olfr392Q7TRX6 312 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Glis2Q8VDL9 521 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 SmtnQ921U8 923 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 AvenQ9D9K3 342 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Olig1Q9JKN5 260 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Vav3Q9R0C8 847 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Dlg5E9Q9R9 1921 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Myh1Q5SX40 1942 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 R3hdm4Q4VBF2 262 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tmem260Q8BMD6 703 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 OgtQ8CGY8 1046 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Slf1Q8R3P9 1054 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ears2Q9CXJ1 523 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rgs3Q9DC04 966 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Efcab12V9GXH0 673 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Lonrf1D3YY23 762 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tac1P41539 130 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rnf113a2Q14B01 337 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Caprin1Q60865 707 aaKnown RBP16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tceal1Q921P9 165 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Nme3Q9WV85 169 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 GabreA2AMW3 916 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 DgkhD3YXJ0 1156 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Foxp2P58463 714 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gm1604bQ3TRG0 118 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fam214aQ69ZK7 1075 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mterf4Q8BVN4 346 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 SgczQ8BX51 311 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ppp1r3aQ99MR9 1089 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Maged2Q9ER67 616 aa16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Wdr46Q9Z0H1 622 aaKnown RBP16.28■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mindy4b-psA0A1W2P7H6 457 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Spata31E9QAF0 1014 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 1700122O11RikJ3QPW6 241 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fgf15O35622 218 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ptger2Q62053 362 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Efl1Q8C0D5 1127 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ero1bQ8R2E9 467 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 VillQ91YD6 859 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Noxred1Q9D3S5 366 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Trpc4Q9QUQ5 974 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Card9A2AIV8 536 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Znf804aA2AKY4 1200 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gm5483B2RV77 97 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Zfp850J3QPC5 689 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Psma2P49722 234 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rab6bP61294 208 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Abhd15Q5F2F2 459 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Zfp454Q80Y34 536 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Chmp2bQ8BJF9 213 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 FdpsQ920E5 353 aa16.27■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Psg29Q3URN6 468 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ntrk3Q6VNS1 825 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Mboat7Q8CHK3 473 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Anapc4Q91W96 807 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Cuedc2Q9CXX9 284 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Rassf7Q9DD19 359 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Edf1Q9JMG1 148 aaKnown RBP16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Unc13dB2RUP2 1085 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 EporP14753 507 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 RelaQ04207 549 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Dab2ipQ3UHC7 1189 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Cyp2j11Q3UNV2 504 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Pde10aQ8CA95 790 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Sertad2Q9JJG5 309 aa16.27■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 PtprvP70289 1705 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gm3424L7N298 263 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gm8246M0QWX9 263 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Ccr1P51675 355 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 1700123K08RikQ9D991 295 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Xpo7Q9EPK7 1087 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Kcng1A2BDX4 514 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 UncxO08934 530 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Nlrp4eQ66X19 978 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Cdc14aQ6GQT0 603 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Vmn2r43Q80Z08 845 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gpc3Q8CFZ4 579 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Nsmce3Q9CPR8 279 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Gstt4Q9D4P7 240 aa16.26■□□□□ 0.19
Ccdc88b-201ENSMUST00000113440 Asah2Q9JHE3 756 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms