RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 NfkbiaQ9Z1E3 314 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ripor3A1L3T7 938 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cd86P42082 309 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Grid1Q61627 1009 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pcyox1Q9CQF9 505 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 PtsQ9R1Z7 144 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cdr2lA2A6T1 465 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pdzrn4E9PUZ9 1014 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 AurkbO70126 345 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 ArP19091 899 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 YdjcQ14BV6 310 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pbxip1Q3TVI8 727 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rbbp7Q60973 425 aaKnown RBP17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Zfp418Q8BFS8 652 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 CntrobQ8CB62 887 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Btbd6Q8K2J9 488 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Usp29Q9ES63 869 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gm29554A0A087WNW4 188 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gm4307E9PZY4 289 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gm4312K9J7E2 289 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Anxa8O35640 327 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 EregQ61521 162 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 OgtQ8CGY8 1046 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 AagabQ8R2R3 316 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Olfm3P63056 478 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Smcr8Q3UMB5 935 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 XpaQ64267 272 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Arhgef19Q8BWA8 802 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tada2aQ8CHV6 443 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Zfp566Q8VCI1 386 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tjp3Q9QXY1 905 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Abt1Q9QYL7 269 aaKnown RBP17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Prex1Q69ZK0 1650 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Apol8A2VDH7 339 aaKnown RBP17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ppargc1aO70343 797 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Abce1P61222 599 aaKnown RBP17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Afg1lQ3V384 480 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tmem260Q8BMD6 703 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 GOLGA7BQ9D428 167 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tlr5Q9JLF7 859 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 XdhQ00519 1335 aa17.34■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Atp8b4A2ANX3 1194 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 A530032D15RikE9Q422 215 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 H2afxP27661 143 aaKnown RBP17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Bace1P56818 501 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ptprn2P80560 1001 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Hif1aQ61221 836 aaKnown RBP17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Slc13a5Q67BT3 572 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Olfr392Q7TRX6 312 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Chn2Q80XD1 332 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Daam1Q8BPM0 1077 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Stau2Q8CJ67 570 aaKnown RBP17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gmcl1Q920G9 524 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 HlcsQ920N2 722 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mss51Q9D5Z5 446 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 IscuQ9D7P6 168 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Efcab12V9GXH0 673 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Sdr16c6Q05A13 316 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 FaxcQ3UMF9 409 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rbm20Q3UQS8 1199 aaKnown RBP17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Zcchc2Q69ZB8 1166 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Fam214aQ69ZK7 1075 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Depdc1aQ8CIG0 804 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Klhl2Q8JZP3 593 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Plcb4Q91UZ1 1175 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tnip2Q99JG7 430 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Homer3Q99JP6 356 aa17.33■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Zfp512bQ6PHP4 879 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Prmt7Q922X9 692 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Map3k20Q9ESL4 802 aaKnown RBP17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Cyp2j11Q3UNV2 504 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fam185aQ7TPD2 378 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 DcpsQ9DAR7 338 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Slfn2Q9Z0I6 378 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Crb1Q8VHS2 1405 aa17.33■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ism1A2ATD1 454 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Olfr310B2RVZ1 332 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Trim43cP86449 446 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ulk3Q3U3Q1 472 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Xlr3aQ60595 226 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Acap2Q6ZQK5 770 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Letm2Q7TNU7 480 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Armc12Q80X86 340 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Usp27Q8CEG8 438 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 HibchQ8QZS1 385 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Cdkl2Q9QUK0 568 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 CltcQ68FD5 1675 aaKnown RBP17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Card9A2AIV8 536 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 EloblA6PWE0 161 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 CrymO54983 313 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Magea1O89006 320 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Magea5O89009 320 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Myl2P51667 166 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 CiitaP79621 1155 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 ScocQ78YZ6 125 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Celf6Q7TN33 460 aaKnown RBP17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Dusp4Q8BFV3 398 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Elmo2Q8BHL5 732 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Snx16Q8C080 344 aa17.32■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mill1Q8HWE7 395 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms