RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Lars2Q8VDC0 902 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Olfr390Q8VEZ7 311 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Taf7lQ9D3R9 471 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Capn6O35646 641 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cyp2j6O54750 501 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Slc1a1P51906 523 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Mmp20P57748 482 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ccdc110Q3V125 848 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rnf139Q7TMV1 668 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Creb3l2Q8BH52 521 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Nsmce3Q9CPR8 279 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Asb1Q9WV74 336 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cd70O55237 195 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Actr2P61161 394 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Grm6Q5NCH9 871 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 HpseQ6YGZ1 535 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Wdr27Q8C5V5 780 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 ItpkaQ8R071 459 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cttnbp2nlQ99LJ0 638 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gbp2Q9Z0E6 589 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ms4a14A0A087WSD2 1232 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Itga9B8JK39 1036 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tp53P02340 387 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Myl2P51667 166 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Trcg1Q58Y74 825 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 CpQ61147 1061 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tcaf1Q8BNE1 924 aa17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rpn1Q91YQ5 608 aaKnown RBP17.05■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ccdc170D3YXL0 722 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gm5689F6Y2A6 97 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rfx2P48379 717 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 GckP52792 465 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gtf2bP62915 316 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ppm1jQ149T7 507 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Frmd8Q3UFK8 466 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Spa17Q62252 149 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Garem2Q6PAJ3 880 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Chmp2bQ8BJF9 213 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Dclre1bQ8C7W7 541 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Uba3Q8C878 462 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 MafaQ8CF90 359 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Trmt10bQ9D075 318 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tex9Q9D845 387 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ror2Q9Z138 944 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 JrklB2RRL2 523 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 CaluO35887 315 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Il2rbP16297 539 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rasgrf1P27671 1262 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Calb2Q08331 271 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ccdc127Q3TC33 260 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cyp2j11Q3UNV2 504 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 MogsQ80UM7 834 aaKnown RBP17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Usp26Q99MX1 835 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ly6iQ9WU67 134 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Mmrn2A6H6E2 943 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Unc13dB2RUP2 1085 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Bace1P56818 501 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Lzts1P60853 599 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tmem63bQ3TWI9 832 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Smg5Q6ZPY2 1017 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Nsun6Q7TS68 476 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Slc39a13Q8BZH0 361 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Kdm1bQ8CIG3 826 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 XkQ9QXY7 446 aa17.04■□□□□ 0.32
Trim28-201ENSMUST00000005705 Frmpd3A0A140LIW3 1774 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ttc17E9PVB5 1198 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Axin1O35625 863 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rad54lP70270 747 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ugt1a1Q63886 535 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 NostrinQ6WKZ7 506 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 MgarpQ8VI64 283 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Terb2Q9D494 218 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Kat2aQ9JHD2 830 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Adrm1Q9JKV1 407 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tmod4Q9JLH8 345 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tcp11x2A2AEI7 503 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Klhl33G3UW92 533 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Barx2O08686 283 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ndufs6P52503 116 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Oog4Q4G0C7 502 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tas2r109Q7M707 316 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Raver2Q7TPD6 673 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 C2cd5Q7TPS5 1016 aaKnown RBP17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tlr3Q99MB1 905 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rnf6Q9DBU5 667 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 GmprQ9DCZ1 345 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Sh2d3cQ9QZS8 854 aa17.03■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rpl21O09167 160 aaKnown RBP17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Serpina1aP07758 413 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 PorP37040 678 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 PtpreP49446 699 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Usp10P52479 792 aaKnown RBP17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tarbp2P97473 365 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Serpina1cQ00896 412 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Serpina1dQ00897 413 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Igsf9Q05BQ1 1179 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Pi4k2aQ2TBE6 479 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Wdr18Q4VBE8 431 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Kcns3Q8BQZ8 491 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Dlk2Q8K1E3 382 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms