RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ugt1a1Q63886 535 aa19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 March4Q80TE3 409 aa19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Heatr3Q8BQM4 679 aa19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Sh3rf3Q8C120 878 aa19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rab44Q8CB87 725 aa19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Slc12a9Q99MR3 914 aa19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ddx56Q9D0R4 546 aaKnown RBP19.75■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Mroh5E9PUJ8 762 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Gm6583E9Q8Z1 469 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Capn6O35646 641 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rag1P15919 1040 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Akr1b7P21300 316 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cyp2j11Q3UNV2 504 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Vps72Q62481 368 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Wdtc1Q80ZK9 677 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cpsf7Q8BTV2 471 aaKnown RBP19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Trappc12Q8K2L8 797 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rpa1Q8VEE4 623 aaKnown RBP19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Trim60Q8VI40 466 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Tmed5Q9CXE7 229 aa19.74■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rpl21O09167 160 aaKnown RBP19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ptk2P34152 1090 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rab20P35295 233 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Pde1bQ01065 535 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Slc24a2Q14BI1 711 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 GsapQ3TCV3 858 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ccdc110Q3V125 848 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Dpysl3Q62188 570 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Zfyve28Q6ZPK7 905 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Plppr4Q7TME0 766 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Pgm5Q8BZF8 567 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Tbrg4Q91YM4 630 aaKnown RBP19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cep72Q9D3R3 646 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Terb2Q9D494 218 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rpap3Q9D706 660 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Sbno2Q7TNB8 1349 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Banf1O54962 89 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Mcpt4P21812 246 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ccdc138Q0VF22 680 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Q80ZQ3 298 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Nlrp4aQ8BU40 982 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Taf2Q8C176 1104 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rabgef1Q9JM13 491 aa19.73■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Gm15262A0A140LIQ5 728 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ildr2B5TVM2 661 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ttc7bE9Q6P5 843 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Slc27a2O35488 620 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 RcvrnP34057 202 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Psen1P49769 467 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ly9Q01965 654 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 EnahQ03173 802 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Tff2Q03404 129 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Myl6Q60605 151 aaKnown RBP19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Mapk4Q6P5G0 583 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Apol7cQ8C6E1 369 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Mrps22Q9CXW2 359 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 PygmQ9WUB3 842 aaKnown RBP19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Sgk1Q9WVC6 431 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Mtmr1Q9Z2C4 669 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cntnap4Q99P47 1310 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 AspgA0JNU3 564 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Gm27029A2A4P4 543 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Dpy19l4A2AJQ3 722 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Tubb1A2AQ07 451 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Dusp8O09112 663 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Gad2P48320 585 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Psmc4P54775 418 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Sh3bp2Q06649 559 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cdca2Q14B71 982 aaKnown RBP19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Dzip1lQ499E4 774 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Syn2Q64332 586 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Nek8Q91ZR4 698 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Tex9Q9D845 387 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cry2Q9R194 592 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Diaph3Q9Z207 1171 aa19.72■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 MafgO54790 162 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ppargc1aO70343 797 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 GnazO70443 355 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Drp2Q05AA6 957 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Nlrp4fQ66X05 959 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Srd5a1Q68FF9 255 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 FAM120AQ6A0A9 1112 aaKnown RBP19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 OafQ8QZR4 282 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Cul2Q9D4H8 745 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Tmem81Q9D5K1 259 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Nudt5Q9JKX6 218 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rfx5Q9JL61 658 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Fgf15O35622 218 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Magea5O89009 320 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Magea8O89012 320 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 PkmP52480 531 aaKnown RBP19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Nrp1P97333 923 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ifnl2Q4VK74 193 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Magea3Q6T340 320 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 HpseQ6YGZ1 535 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Glra2Q7TNC8 452 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Rpp40Q8R1F9 363 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Ap3m2Q8R2R9 418 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Lrrc8cQ8R502 803 aa19.71■□□□□ 0.75
Shkbp1-201ENSMUST00000003857 Lman1lQ8VCD3 505 aa19.71■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 117.5 ms