RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C MET2P08465 486 aa3.11□□□□□ -1.91
VPS21YOR089C SNF4P12904 322 aa3.11□□□□□ -1.91
VPS21YOR089C TOM40P23644 387 aaKnown RBP3.11□□□□□ -1.91
VPS21YOR089C ERG24P32462 438 aaKnown RBP3.11□□□□□ -1.91
VPS21YOR089C SRY1P36007 326 aa3.11□□□□□ -1.91
VPS21YOR089C RCN1P36054 211 aa3.11□□□□□ -1.91
VPS21YOR089C EGD2P38879 174 aaKnown RBP3.11□□□□□ -1.91
VPS21YOR089C SEC72P39742 193 aaKnown RBP3.11□□□□□ -1.91
VPS21YOR089C YER034WP40022 185 aaKnown RBP3.11□□□□□ -1.91
VPS21YOR089C YGL159WP53110 370 aa3.11□□□□□ -1.91
VPS21YOR089C YLR030WQ07967 263 aa3.11□□□□□ -1.91
VPS21YOR089C MDM32Q12171 622 aa3.11□□□□□ -1.91
VPS21YOR089C BBP1Q12365 385 aa3.11□□□□□ -1.91
VPS21YOR089C YCL012CQ8J0M4 134 aa3.11□□□□□ -1.91
VPS21YOR089C CPA1P07258 411 aaKnown RBP3.1□□□□□ -1.91
VPS21YOR089C YBR285WP38354 144 aa3.1□□□□□ -1.91
VPS21YOR089C DOG2P38773 246 aa3.1□□□□□ -1.91
VPS21YOR089C DOG1P38774 246 aa3.1□□□□□ -1.91
VPS21YOR089C MTW1P39731 289 aa3.1□□□□□ -1.91
VPS21YOR089C OST2P46964 130 aa3.1□□□□□ -1.91
VPS21YOR089C MMS2P53152 137 aa3.1□□□□□ -1.91
VPS21YOR089C ERV29P53337 310 aa3.1□□□□□ -1.91
VPS21YOR089C IGO1P53897 168 aa3.1□□□□□ -1.91
VPS21YOR089C YMR279CQ03263 540 aa3.1□□□□□ -1.91
VPS21YOR089C GRH1Q04410 372 aaKnown RBP3.1□□□□□ -1.91
VPS21YOR089C FCF1Q05498 189 aaPredicted RBP3.1□□□□□ -1.91
VPS21YOR089C YOL131WQ08270 108 aa3.1□□□□□ -1.91
VPS21YOR089C MSA1Q08471 629 aa3.1□□□□□ -1.91
VPS21YOR089C YDR034W-BQ6Q5X2 51 aa3.1□□□□□ -1.91
VPS21YOR089C YPR096CO13587 100 aa3.09□□□□□ -1.91
VPS21YOR089C RAS2P01120 322 aaKnown RBP3.09□□□□□ -1.91
VPS21YOR089C HIS3P06633 220 aa3.09□□□□□ -1.91
VPS21YOR089C DSF1P0CX08 502 aa3.09□□□□□ -1.91
VPS21YOR089C YNR073CP0CX09 502 aa3.09□□□□□ -1.91
VPS21YOR089C ADE1P27616 306 aa3.09□□□□□ -1.91
VPS21YOR089C VPS51P36116 164 aa3.09□□□□□ -1.91
VPS21YOR089C GRE3P38715 327 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
VPS21YOR089C MED6P38782 295 aa3.09□□□□□ -1.91
VPS21YOR089C RPF1P38805 295 aaKnown RBP3.09□□□□□ -1.91
VPS21YOR089C YEL073CP39974 107 aa3.09□□□□□ -1.91
VPS21YOR089C RGI1P40043 161 aaPredicted RBP3.09□□□□□ -1.91
VPS21YOR089C PDS1P40316 373 aaPredicted RBP3.09□□□□□ -1.91
VPS21YOR089C PFS2P42841 465 aaKnown RBP3.09□□□□□ -1.91
VPS21YOR089C YJR056CP47115 236 aa3.09□□□□□ -1.91
VPS21YOR089C VMA10P48836 114 aaKnown RBP3.09□□□□□ -1.91
VPS21YOR089C SYF2P53277 215 aaPredicted RBP3.09□□□□□ -1.91
VPS21YOR089C PEX12Q04370 399 aa3.09□□□□□ -1.91
VPS21YOR089C GPI11Q06636 219 aa3.09□□□□□ -1.91
VPS21YOR089C FAB1P34756 2278 aa3.09□□□□□ -1.92
VPS21YOR089C YPR117WQ06116 2489 aa3.09□□□□□ -1.92
VPS21YOR089C FBA1P14540 359 aaKnown RBP3.08□□□□□ -1.92
VPS21YOR089C FCY2P17064 533 aa3.08□□□□□ -1.92
VPS21YOR089C OAC1P32332 324 aa3.08□□□□□ -1.92
VPS21YOR089C SPS18P32572 300 aa3.08□□□□□ -1.92
VPS21YOR089C SEC17P32602 292 aa3.08□□□□□ -1.92
VPS21YOR089C FMT1P32785 401 aa3.08□□□□□ -1.92
VPS21YOR089C MSA2P36157 363 aa3.08□□□□□ -1.92
VPS21YOR089C MRPL28P36527 147 aa3.08□□□□□ -1.92
VPS21YOR089C SHG1P38337 142 aa3.08□□□□□ -1.92
VPS21YOR089C YAR068WP39564 161 aa3.08□□□□□ -1.92
VPS21YOR089C ARC15P40518 154 aaRIP-Chip data3.08□□□□□ -1.92not detected
VPS21YOR089C YJR141WP47172 347 aaPredicted RBP3.08□□□□□ -1.92
VPS21YOR089C DIA1P54005 336 aa3.08□□□□□ -1.92
VPS21YOR089C MET31Q03081 177 aa3.08□□□□□ -1.92
VPS21YOR089C YMR099CQ03161 297 aaKnown RBP3.08□□□□□ -1.92
VPS21YOR089C VPS68Q12016 184 aa3.08□□□□□ -1.92
VPS21YOR089C CMC2Q3E7A4 109 aa3.08□□□□□ -1.92
VPS21YOR089C MSB2P32334 1306 aa3.08□□□□□ -1.92
VPS21YOR089C RPL25P04456 142 aaKnown RBP3.07□□□□□ -1.92
VPS21YOR089C SGA1P08019 549 aa3.07□□□□□ -1.92
VPS21YOR089C APA2P22108 325 aa3.07□□□□□ -1.92
VPS21YOR089C TRX3P25372 127 aa3.07□□□□□ -1.92
VPS21YOR089C YBR063CP38083 404 aa3.07□□□□□ -1.92
VPS21YOR089C RMD6P39975 231 aa3.07□□□□□ -1.92
VPS21YOR089C GIM4P40005 111 aaKnown RBP3.07□□□□□ -1.92
VPS21YOR089C MPM1P40364 252 aa3.07□□□□□ -1.92
VPS21YOR089C ATG10Q07879 167 aa3.07□□□□□ -1.92
VPS21YOR089C MHF2Q3E829 80 aa3.07□□□□□ -1.92
VPS21YOR089C YPL229WQ99395 206 aa3.07□□□□□ -1.92
VPS21YOR089C UBC8P28263 218 aa3.06□□□□□ -1.92
VPS21YOR089C YGR026WP53217 278 aa3.06□□□□□ -1.92
VPS21YOR089C YNL140CP53910 189 aa3.06□□□□□ -1.92
VPS21YOR089C TMA20P89886 181 aaPredicted RBP3.06□□□□□ -1.92
VPS21YOR089C YNG1Q08465 219 aa3.06□□□□□ -1.92
VPS21YOR089C NIP7Q08962 181 aaKnown RBP3.06□□□□□ -1.92
VPS21YOR089C CCH1P50077 2039 aa3.05□□□□□ -1.92
VPS21YOR089C TIM9O74700 87 aa3.05□□□□□ -1.92
VPS21YOR089C RPS23AP0CX29 145 aaKnown RBP3.05□□□□□ -1.92
VPS21YOR089C RPS23BP0CX30 145 aa3.05□□□□□ -1.92
VPS21YOR089C ECM4P36156 370 aa3.05□□□□□ -1.92
VPS21YOR089C YER188WP40103 239 aa3.05□□□□□ -1.92
VPS21YOR089C TIF34P40217 347 aaKnown RBP3.05□□□□□ -1.92
VPS21YOR089C GON7P46984 123 aa3.05□□□□□ -1.92
VPS21YOR089C LSM7P53905 115 aaKnown RBP3.05□□□□□ -1.92
VPS21YOR089C SWP1Q02795 286 aa3.05□□□□□ -1.92
VPS21YOR089C ATG39Q06159 398 aa3.05□□□□□ -1.92
VPS21YOR089C RIB3Q99258 208 aa3.05□□□□□ -1.92
VPS21YOR089C SEC4P07560 215 aaKnown RBP3.04□□□□□ -1.92
VPS21YOR089C SNF6P18888 332 aa3.04□□□□□ -1.92
VPS21YOR089C SCL1P21243 252 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms