RNA–Protein interactions for RNA: YNL321W

VNX1, Transcript of Calcium/H+ antiporter localized to the endoplasmic reticulum membrane, yeast

Gene VNX1, Length 2,727 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VNX1	YNL321W	YDL180W	Q12301	547 aa		4.95	□□□□□ -1.62
VNX1	YNL321W	COX5B	P00425	151 aa		4.95	□□□□□ -1.62
VNX1	YNL321W	CDC28	P00546	298 aa	Known RBP	4.95	□□□□□ -1.62
VNX1	YNL321W	COS8	P38723	381 aa		4.95	□□□□□ -1.62
VNX1	YNL321W	OXA1	P39952	402 aa		4.95	□□□□□ -1.62
VNX1	YNL321W	YCH1	P42937	148 aa		4.95	□□□□□ -1.62
VNX1	YNL321W	YML108W	Q03759	105 aa		4.95	□□□□□ -1.62
VNX1	YNL321W	PBP4	Q07362	185 aa	Known RBP	4.95	□□□□□ -1.62
VNX1	YNL321W	TPI1	P00942	248 aa	Known RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	MIR1	P23641	311 aa	Known RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	POP5	P28005	173 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	POP8	P38208	133 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	ARC40	P38328	384 aa	Known RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	ALG9	P53868	555 aa	Known RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	TFC7	Q12415	435 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	POL2	P21951	2222 aa	Known RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	SAL1	D6W196	494 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	SEC22	P22214	214 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	YBL010C	P32788	280 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	ASP1	P38986	381 aa	Predicted RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	GLR1	P41921	483 aa	Known RBP	4.94	□□□□□ -1.62
VNX1	YNL321W	ATP14	Q12349	124 aa		4.94	□□□□□ -1.62
VNX1	YNL321W	FAS1	P07149	2051 aa	Known RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	ACC1	Q00955	2233 aa	Known RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	GCV3	P39726	170 aa	Predicted RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	YER079W	P40052	210 aa	Known RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	IKS1	P47042	667 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	TAD2	P47058	250 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	MIC26	P50087	233 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	ACT1	P60010	375 aa	Known RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	DCN1	Q12395	269 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	YLR361C-A	Q3E795	98 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	LAC1	P28496	418 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	EMP24	P32803	203 aa	Known RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	YND1	P40009	630 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	CCS1	P40202	249 aa	Known RBP	4.93	□□□□□ -1.62
VNX1	YNL321W	PRM5	P40476	318 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	YDL086W	Q07505	273 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	THI72	Q08579	599 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	YCT1	Q12235	531 aa		4.93	□□□□□ -1.62
VNX1	YNL321W	RPL7A	P05737	244 aa	Known RBP	4.92	□□□□□ -1.62
VNX1	YNL321W	SHG1	P38337	142 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	PEX7	P39108	375 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	YIL029C	P40538	142 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	THI74	Q04083	370 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	RPL7B	Q12213	244 aa	Known RBP	4.92	□□□□□ -1.62
VNX1	YNL321W	YLR365W	Q7LIF2	110 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	REP2	P03872	296 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	PDC2	P32896	925 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	LSM12	P38828	187 aa	Known RBP	4.92	□□□□□ -1.62
VNX1	YNL321W	XBP1	P40489	647 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	UFD1	P53044	361 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	DYN2	Q02647	92 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	YHR213W-A	Q8TGT4	77 aa		4.92	□□□□□ -1.62
VNX1	YNL321W	CUP2	P15315	225 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	YIR035C	P40579	254 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	YPR098C	Q06089	161 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	YOL029C	Q08187	201 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	PCL1	P24867	279 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	POF1	P25576	258 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	YKL075C	P36083	450 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	SOL1	P50278	321 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	RCE1	Q03530	315 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	RUB1	Q03919	77 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	HUT1	Q12520	339 aa		4.91	□□□□□ -1.62
VNX1	YNL321W	RPS28B	P0C0X0	67 aa	Known RBP	4.9	□□□□□ -1.62
VNX1	YNL321W	MOH1	P38191	138 aa		4.9	□□□□□ -1.62
VNX1	YNL321W	BUL1	P48524	976 aa		4.9	□□□□□ -1.62
VNX1	YNL321W	GPI15	P53961	229 aa		4.9	□□□□□ -1.62
VNX1	YNL321W	YOR186W	Q08560	144 aa		4.9	□□□□□ -1.62
VNX1	YNL321W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.9	□□□□□ -1.62
VNX1	YNL321W	RNA15	P25299	296 aa	Predicted RBP	4.9	□□□□□ -1.63
VNX1	YNL321W	LDS1	P31379	325 aa		4.9	□□□□□ -1.63
VNX1	YNL321W	OCH1	P31755	480 aa		4.9	□□□□□ -1.63
VNX1	YNL321W	AGA2	P32781	87 aa		4.9	□□□□□ -1.63
VNX1	YNL321W	OST3	P48439	350 aa		4.9	□□□□□ -1.63
VNX1	YNL321W	YIF1	P53845	314 aa	Known RBP	4.9	□□□□□ -1.63
VNX1	YNL321W	YMR254C	Q04838	102 aa		4.9	□□□□□ -1.63
VNX1	YNL321W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
VNX1	YNL321W	UBI4	P0CG63	381 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	RPL40A	P0CH08	128 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	RPL40B	P0CH09	128 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	SPS18	P32572	300 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	GLC7	P32598	312 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	ELF1	P36053	145 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	KAE1	P36132	386 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	COX15	P40086	486 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	PHO23	P50947	330 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	ARC18	Q05933	178 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	RRS1	Q08746	203 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	RKI1	Q12189	258 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	EAF3	Q12432	401 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	YLR146W-A	Q2V2P1	62 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	RPL25	P04456	142 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	RPL31A	P0C2H8	113 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	TIP1	P27654	210 aa	Predicted RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	YIL169C	P40442	995 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	AIR1	P40507	360 aa	Known RBP	4.89	□□□□□ -1.63
VNX1	YNL321W	PIN3	Q06449	215 aa		4.89	□□□□□ -1.63
VNX1	YNL321W	PRP11	Q07350	266 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms