RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C APQ12P40532 138 aa3.72□□□□□ -1.81
MRE11YMR224C DSK2P48510 373 aa3.72□□□□□ -1.81
MRE11YMR224C YKR032WP36127 104 aa3.71□□□□□ -1.82
MRE11YMR224C YGR201CP42936 225 aa3.71□□□□□ -1.82
MRE11YMR224C XPT1P47165 209 aa3.71□□□□□ -1.82
MRE11YMR224C RAV2Q03956 351 aa3.71□□□□□ -1.82
MRE11YMR224C YFL019CP43576 117 aa3.71□□□□□ -1.82
MRE11YMR224C YLR412C-AQ3E742 68 aa3.71□□□□□ -1.82
MRE11YMR224C MID2P36027 376 aa3.7□□□□□ -1.82
MRE11YMR224C YER134CP40081 178 aa3.7□□□□□ -1.82
MRE11YMR224C PIR5P46999 287 aa3.7□□□□□ -1.82
MRE11YMR224C RBL2P48606 106 aaKnown RBP3.7□□□□□ -1.82
MRE11YMR224C AIF1P52923 378 aa3.7□□□□□ -1.82
MRE11YMR224C ORM1P53224 222 aa3.7□□□□□ -1.82
MRE11YMR224C NAT3Q06504 195 aa3.7□□□□□ -1.82
MRE11YMR224C SFK1P35735 353 aa3.69□□□□□ -1.82
MRE11YMR224C GVP36P40531 326 aaKnown RBP3.69□□□□□ -1.82
MRE11YMR224C YDR274CP87283 123 aa3.69□□□□□ -1.82
MRE11YMR224C ECM11Q04110 302 aa3.69□□□□□ -1.82
MRE11YMR224C SCW10Q04951 389 aa3.69□□□□□ -1.82
MRE11YMR224C ODC2Q99297 307 aa3.69□□□□□ -1.82
MRE11YMR224C BUD13P46947 266 aaPredicted RBP3.69□□□□□ -1.82
MRE11YMR224C CAB4P53332 305 aa3.69□□□□□ -1.82
MRE11YMR224C SPG3Q04398 127 aaPredicted RBP3.69□□□□□ -1.82
MRE11YMR224C TAF2P23255 1407 aa3.68□□□□□ -1.82
MRE11YMR224C DLS1P40366 167 aa3.68□□□□□ -1.82
MRE11YMR224C HHT1P61830 136 aa3.68□□□□□ -1.82
MRE11YMR224C CSN9Q03981 162 aa3.68□□□□□ -1.82
MRE11YMR224C YAR023CD6VPM8 179 aa3.67□□□□□ -1.82
MRE11YMR224C MSW1P04803 379 aa3.67□□□□□ -1.82
MRE11YMR224C RPS23AP0CX29 145 aaKnown RBP3.67□□□□□ -1.82
MRE11YMR224C RPS23BP0CX30 145 aa3.67□□□□□ -1.82
MRE11YMR224C PAN3P36102 679 aaPredicted RBP3.67□□□□□ -1.82
MRE11YMR224C FCY21P40039 528 aa3.67□□□□□ -1.82
MRE11YMR224C VTC1P40046 129 aaRIP-Chip data3.67□□□□□ -1.82not detected
MRE11YMR224C YIL059CP40520 121 aa3.67□□□□□ -1.82
MRE11YMR224C YIR035CP40579 254 aa3.67□□□□□ -1.82
MRE11YMR224C CPA1P07258 411 aaKnown RBP3.67□□□□□ -1.82
MRE11YMR224C STP22P25604 385 aa3.67□□□□□ -1.82
MRE11YMR224C YJR015WP47090 510 aa3.67□□□□□ -1.82
MRE11YMR224C RPL30P14120 105 aaKnown RBP3.66□□□□□ -1.82
MRE11YMR224C YMR320WQ04897 101 aa3.66□□□□□ -1.82
MRE11YMR224C YNL200CP40165 246 aaKnown RBP3.66□□□□□ -1.82
MRE11YMR224C YER084WP40057 128 aa3.65□□□□□ -1.83
MRE11YMR224C VPS71Q03433 280 aa3.65□□□□□ -1.83
MRE11YMR224C UMP1P38293 148 aa3.64□□□□□ -1.83
MRE11YMR224C PGD1P40356 397 aa3.64□□□□□ -1.83
MRE11YMR224C YDR114CQ04597 100 aa3.64□□□□□ -1.83
MRE11YMR224C FEX1Q08913 375 aa3.64□□□□□ -1.83
MRE11YMR224C FEX2Q08991 375 aa3.64□□□□□ -1.83
MRE11YMR224C YLR361C-AQ3E795 98 aa3.64□□□□□ -1.83
MRE11YMR224C RIB3Q99258 208 aa3.64□□□□□ -1.83
MRE11YMR224C SCM4P32564 187 aa3.64□□□□□ -1.83
MRE11YMR224C YMR099CQ03161 297 aaKnown RBP3.64□□□□□ -1.83
MRE11YMR224C FKS1P38631 1876 aaKnown RBP3.64□□□□□ -1.83
MRE11YMR224C SOD1P00445 154 aaKnown RBP3.63□□□□□ -1.83
MRE11YMR224C CPR5P35176 225 aa3.63□□□□□ -1.83
MRE11YMR224C PST2Q12335 198 aaKnown RBP3.63□□□□□ -1.83
MRE11YMR224C SNC2P33328 115 aa3.63□□□□□ -1.83
MRE11YMR224C YBR285WP38354 144 aa3.63□□□□□ -1.83
MRE11YMR224C NEJ1Q06148 342 aa3.63□□□□□ -1.83
MRE11YMR224C POR1P04840 283 aaKnown RBP3.62□□□□□ -1.83
MRE11YMR224C FYV4P38783 130 aaPredicted RBP3.62□□□□□ -1.83
MRE11YMR224C YHR180WP38868 163 aa3.62□□□□□ -1.83
MRE11YMR224C YPL073CP40323 161 aa3.62□□□□□ -1.83
MRE11YMR224C CCC1P47818 322 aa3.62□□□□□ -1.83
MRE11YMR224C DOC1P53068 250 aa3.62□□□□□ -1.83
MRE11YMR224C RFU1Q08003 200 aa3.62□□□□□ -1.83
MRE11YMR224C HRD1Q08109 551 aa3.62□□□□□ -1.83
MRE11YMR224C YOR214CQ12282 236 aa3.62□□□□□ -1.83
MRE11YMR224C PHB1P40961 287 aa3.61□□□□□ -1.83
MRE11YMR224C FIP1P45976 327 aa3.61□□□□□ -1.83
MRE11YMR224C DYN2Q02647 92 aa3.61□□□□□ -1.83
MRE11YMR224C ATP5P09457 212 aa3.61□□□□□ -1.83
MRE11YMR224C SHE2P36068 246 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
MRE11YMR224C GLR1P41921 483 aaKnown RBP3.61□□□□□ -1.83
MRE11YMR224C ERJ5P43613 295 aaPredicted RBP3.61□□□□□ -1.83
MRE11YMR224C YFR054CP43622 192 aa3.61□□□□□ -1.83
MRE11YMR224C TIM13P53299 105 aa3.61□□□□□ -1.83
MRE11YMR224C ATO3Q12359 275 aa3.61□□□□□ -1.83
MRE11YMR224C YHL026CP38740 315 aa3.6□□□□□ -1.83
MRE11YMR224C VMA22P38784 181 aa3.6□□□□□ -1.83
MRE11YMR224C EAF6P47128 113 aa3.6□□□□□ -1.83
MRE11YMR224C UBC7Q02159 165 aa3.6□□□□□ -1.83
MRE11YMR224C FYV12Q08559 129 aa3.6□□□□□ -1.83
MRE11YMR224C RSA4P25382 515 aaKnown RBP3.59□□□□□ -1.83
MRE11YMR224C AGA2P32781 87 aa3.59□□□□□ -1.83
MRE11YMR224C MPC3P53311 146 aa3.59□□□□□ -1.83
MRE11YMR224C FSF1Q12029 327 aaKnown RBP3.59□□□□□ -1.83
MRE11YMR224C TIR1P10863 254 aa3.59□□□□□ -1.83
MRE11YMR224C NSP1P14907 823 aaKnown RBP3.59□□□□□ -1.83
MRE11YMR224C SUA7P29055 345 aaPredicted RBP3.59□□□□□ -1.83
MRE11YMR224C PRS3P38689 320 aaKnown RBP3.59□□□□□ -1.83
MRE11YMR224C MRPS8Q03799 155 aa3.59□□□□□ -1.83
MRE11YMR224C GAL83Q04739 417 aa3.59□□□□□ -1.83
MRE11YMR224C RPL26AP05743 127 aaKnown RBP3.58□□□□□ -1.84
MRE11YMR224C KRE1P17260 313 aa3.58□□□□□ -1.84
MRE11YMR224C SCL1P21243 252 aaKnown RBP3.58□□□□□ -1.84
MRE11YMR224C RPL26BP53221 127 aaKnown RBP3.58□□□□□ -1.84
MRE11YMR224C NHP6AP11632 93 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms