RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W ADO1P47143 340 aaKnown RBP3.53□□□□□ -1.84
VPS36YLR417W PRM15Q03262 622 aa3.53□□□□□ -1.84
VPS36YLR417W MDM32Q12171 622 aa3.53□□□□□ -1.84
VPS36YLR417W GEP5Q12393 293 aa3.53□□□□□ -1.84
VPS36YLR417W MYO1P08964 1928 aa3.53□□□□□ -1.84
VPS36YLR417W RPS23AP0CX29 145 aaKnown RBP3.53□□□□□ -1.85
VPS36YLR417W RPS23BP0CX30 145 aa3.53□□□□□ -1.85
VPS36YLR417W APA2P22108 325 aa3.53□□□□□ -1.85
VPS36YLR417W CNB1P25296 175 aa3.53□□□□□ -1.85
VPS36YLR417W AGA2P32781 87 aa3.53□□□□□ -1.85
VPS36YLR417W PTC1P35182 281 aa3.53□□□□□ -1.85
VPS36YLR417W GRE3P38715 327 aaKnown RBP RIP-Chip data3.53□□□□□ -1.85not detected
VPS36YLR417W RMD6P39975 231 aa3.53□□□□□ -1.85
VPS36YLR417W PFS2P42841 465 aaKnown RBP3.53□□□□□ -1.85
VPS36YLR417W NUP49Q02199 472 aa3.53□□□□□ -1.85
VPS36YLR417W YLR179CQ06252 201 aaKnown RBP3.53□□□□□ -1.85
VPS36YLR417W YMR030W-AQ3E760 96 aa3.53□□□□□ -1.85
VPS36YLR417W GRX2P17695 143 aaKnown RBP3.52□□□□□ -1.85
VPS36YLR417W BUB2P26448 306 aaPredicted RBP3.52□□□□□ -1.85
VPS36YLR417W MRPL17P36528 281 aa3.52□□□□□ -1.85
VPS36YLR417W YBR063CP38083 404 aa3.52□□□□□ -1.85
VPS36YLR417W IKI1P38874 309 aa3.52□□□□□ -1.85
VPS36YLR417W CSN9Q03981 162 aa3.52□□□□□ -1.85
VPS36YLR417W YOL131WQ08270 108 aa3.52□□□□□ -1.85
VPS36YLR417W MSA1Q08471 629 aa3.52□□□□□ -1.85
VPS36YLR417W SUS1Q6WNK7 96 aa3.52□□□□□ -1.85
VPS36YLR417W YRF1-3P0CX14 1859 aa3.51□□□□□ -1.85
VPS36YLR417W YRF1-7P0CX15 1859 aa3.51□□□□□ -1.85
VPS36YLR417W YRF1-6P53819 1859 aa3.51□□□□□ -1.85
VPS36YLR417W YPK2P18961 677 aa3.51□□□□□ -1.85
VPS36YLR417W IDP1P21954 428 aaKnown RBP3.51□□□□□ -1.85
VPS36YLR417W YPT52P36018 234 aaKnown RBP3.51□□□□□ -1.85
VPS36YLR417W CAF4P36130 643 aa3.51□□□□□ -1.85
VPS36YLR417W AIM2P39721 246 aa3.51□□□□□ -1.85
VPS36YLR417W PEX17P40155 199 aa3.51□□□□□ -1.85
VPS36YLR417W AIF1P52923 378 aa3.51□□□□□ -1.85
VPS36YLR417W EFM5P53200 248 aaKnown RBP3.51□□□□□ -1.85
VPS36YLR417W HHO1P53551 258 aa3.51□□□□□ -1.85
VPS36YLR417W LSM7P53905 115 aaKnown RBP3.51□□□□□ -1.85
VPS36YLR417W SUE1Q06524 206 aa3.51□□□□□ -1.85
VPS36YLR417W YPR195CQ06594 109 aa3.51□□□□□ -1.85
VPS36YLR417W FIG2P25653 1609 aa3.51□□□□□ -1.85
VPS36YLR417W HTB1P02293 131 aaKnown RBP3.5□□□□□ -1.85
VPS36YLR417W HTB2P02294 131 aa3.5□□□□□ -1.85
VPS36YLR417W SPS2P08459 502 aa3.5□□□□□ -1.85
VPS36YLR417W PET54P10834 293 aa3.5□□□□□ -1.85
VPS36YLR417W TAH1P25638 111 aaPredicted RBP3.5□□□□□ -1.85
VPS36YLR417W SRB6P32570 121 aa3.5□□□□□ -1.85
VPS36YLR417W SRY1P36007 326 aa3.5□□□□□ -1.85
VPS36YLR417W AYR1P40471 297 aa3.5□□□□□ -1.85
VPS36YLR417W MAK3Q03503 176 aa3.5□□□□□ -1.85
VPS36YLR417W YMD8Q03697 442 aa3.5□□□□□ -1.85
VPS36YLR417W YDR114CQ04597 100 aa3.5□□□□□ -1.85
VPS36YLR417W AGC1Q12482 902 aa3.5□□□□□ -1.85
VPS36YLR417W EFG1Q3E705 233 aaKnown RBP3.5□□□□□ -1.85
VPS36YLR417W SGA1P08019 549 aa3.5□□□□□ -1.85
VPS36YLR417W RFA3P26755 122 aaKnown RBP3.5□□□□□ -1.85
VPS36YLR417W RPS1AP33442 255 aaKnown RBP3.5□□□□□ -1.85
VPS36YLR417W TVP38P36164 337 aa3.5□□□□□ -1.85
VPS36YLR417W NSG1P38837 291 aa3.5□□□□□ -1.85
VPS36YLR417W SPO73P40031 143 aa3.5□□□□□ -1.85
VPS36YLR417W RGI1P40043 161 aaPredicted RBP3.5□□□□□ -1.85
VPS36YLR417W CAT5P41735 233 aa3.5□□□□□ -1.85
VPS36YLR417W YAE1P47118 141 aaPredicted RBP3.5□□□□□ -1.85
VPS36YLR417W RPS12P48589 143 aaKnown RBP3.5□□□□□ -1.85
VPS36YLR417W YGL159WP53110 370 aa3.5□□□□□ -1.85
VPS36YLR417W GAS3Q03655 524 aa3.5□□□□□ -1.85
VPS36YLR417W HTL1Q9URQ5 78 aa3.5□□□□□ -1.85
VPS36YLR417W FLO1P32768 1537 aa3.49□□□□□ -1.85
VPS36YLR417W COX5AP00424 153 aa3.49□□□□□ -1.85
VPS36YLR417W RPS1BP23248 255 aaKnown RBP3.49□□□□□ -1.85
VPS36YLR417W ERG24P32462 438 aaKnown RBP3.49□□□□□ -1.85
VPS36YLR417W YMR279CQ03263 540 aa3.49□□□□□ -1.85
VPS36YLR417W GRX8Q05926 109 aa3.49□□□□□ -1.85
VPS36YLR417W YLR030WQ07967 263 aa3.49□□□□□ -1.85
VPS36YLR417W YPL257WQ08974 193 aa3.49□□□□□ -1.85
VPS36YLR417W ATP14Q12349 124 aa3.49□□□□□ -1.85
VPS36YLR417W RIM15P43565 1770 aa3.49□□□□□ -1.85
VPS36YLR417W CDC28P00546 298 aaKnown RBP3.48□□□□□ -1.85
VPS36YLR417W CDC7P06243 507 aa3.48□□□□□ -1.85
VPS36YLR417W RPL27AP0C2H6 136 aaKnown RBP3.48□□□□□ -1.85
VPS36YLR417W RPL27BP0C2H7 136 aaKnown RBP3.48□□□□□ -1.85
VPS36YLR417W MAG1P22134 296 aaKnown RBP3.48□□□□□ -1.85
VPS36YLR417W MSA2P36157 363 aa3.48□□□□□ -1.85
VPS36YLR417W ERV15P38312 142 aa3.48□□□□□ -1.85
VPS36YLR417W NVJ1P38881 321 aa3.48□□□□□ -1.85
VPS36YLR417W PGD1P40356 397 aa3.48□□□□□ -1.85
VPS36YLR417W YJL218WP40892 196 aaKnown RBP3.48□□□□□ -1.85
VPS36YLR417W BOL2P53082 120 aa3.48□□□□□ -1.85
VPS36YLR417W PRM8P53174 237 aa3.48□□□□□ -1.85
VPS36YLR417W MZM1Q03429 123 aaPredicted RBP3.48□□□□□ -1.85
VPS36YLR417W GPM2Q12008 311 aa3.48□□□□□ -1.85
VPS36YLR417W MET2P08465 486 aa3.47□□□□□ -1.85
VPS36YLR417W ARO7P32178 256 aa3.47□□□□□ -1.85
VPS36YLR417W YGP1P38616 354 aaKnown RBP3.47□□□□□ -1.85
VPS36YLR417W COG3P40094 801 aa3.47□□□□□ -1.85
VPS36YLR417W TIR3P40552 269 aa3.47□□□□□ -1.85
VPS36YLR417W OST2P46964 130 aa3.47□□□□□ -1.85
VPS36YLR417W MOG1P47123 218 aa3.47□□□□□ -1.85
VPS36YLR417W BXI1P48558 297 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms