RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C YGR035W-AQ45U48 73 aa8.17□□□□□ -1.1
SHB17YKR043C NOP1P15646 327 aaKnown RBP8.16□□□□□ -1.1
SHB17YKR043C PRS4P38063 326 aaPredicted RBP8.16□□□□□ -1.1
SHB17YKR043C YPC1P38298 316 aa8.16□□□□□ -1.1
SHB17YKR043C GPP2P40106 250 aaKnown RBP8.16□□□□□ -1.1
SHB17YKR043C HAM1P47119 197 aaKnown RBP8.16□□□□□ -1.1
SHB17YKR043C GNP1P48813 663 aa8.16□□□□□ -1.1
SHB17YKR043C DFG10P40526 253 aa8.15□□□□□ -1.1
SHB17YKR043C AGE2P40529 298 aa8.15□□□□□ -1.1
SHB17YKR043C YIR035CP40579 254 aa8.15□□□□□ -1.1
SHB17YKR043C FIP1P45976 327 aa8.15□□□□□ -1.1
SHB17YKR043C HED1Q03937 162 aa8.15□□□□□ -1.1
SHB17YKR043C NDE2Q07500 545 aa8.15□□□□□ -1.1
SHB17YKR043C ILV5P06168 395 aaKnown RBP8.14□□□□□ -1.11
SHB17YKR043C MRS4P23500 304 aa8.14□□□□□ -1.11
SHB17YKR043C GEP4P38812 185 aa8.14□□□□□ -1.11
SHB17YKR043C YJR112W-AQ3E743 109 aa8.14□□□□□ -1.11
SHB17YKR043C RRF1P38771 230 aa8.13□□□□□ -1.11
SHB17YKR043C VPS55P47111 140 aa8.13□□□□□ -1.11
SHB17YKR043C UBC12P52491 188 aa8.13□□□□□ -1.11
SHB17YKR043C YGR050CP53231 118 aa8.13□□□□□ -1.11
SHB17YKR043C MSO1P53604 210 aaKnown RBP8.13□□□□□ -1.11
SHB17YKR043C YML122CQ03207 126 aa8.13□□□□□ -1.11
SHB17YKR043C YLR224WQ05947 369 aa8.13□□□□□ -1.11
SHB17YKR043C ERV1P27882 189 aa8.12□□□□□ -1.11
SHB17YKR043C SWM2P40342 146 aa8.12□□□□□ -1.11
SHB17YKR043C LST8P41318 303 aa8.12□□□□□ -1.11
SHB17YKR043C HOR7Q05827 59 aa8.12□□□□□ -1.11
SHB17YKR043C YGL258W-AQ3E740 77 aa8.12□□□□□ -1.11
SHB17YKR043C TIP1P27654 210 aaPredicted RBP8.11□□□□□ -1.11
SHB17YKR043C YKL162CP36052 402 aa8.11□□□□□ -1.11
SHB17YKR043C YKL075CP36083 450 aa8.11□□□□□ -1.11
SHB17YKR043C YBR184WP38299 523 aa8.11□□□□□ -1.11
SHB17YKR043C RPL13BP40212 199 aaKnown RBP8.11□□□□□ -1.11
SHB17YKR043C SSU72P53538 206 aaPredicted RBP8.11□□□□□ -1.11
SHB17YKR043C YIF1P53845 314 aaKnown RBP8.11□□□□□ -1.11
SHB17YKR043C RKI1Q12189 258 aa8.11□□□□□ -1.11
SHB17YKR043C LAS17Q12446 633 aa8.11□□□□□ -1.11
SHB17YKR043C RPL13AQ12690 199 aaPredicted RBP8.11□□□□□ -1.11
SHB17YKR043C YBR085C-AO43137 85 aa8.1□□□□□ -1.11
SHB17YKR043C SOD1P00445 154 aaKnown RBP8.1□□□□□ -1.11
SHB17YKR043C RPD3P32561 433 aa8.1□□□□□ -1.11
SHB17YKR043C RFC2P40348 353 aa8.1□□□□□ -1.11
SHB17YKR043C EST3Q03096 181 aa8.1□□□□□ -1.11
SHB17YKR043C PBP4Q07362 185 aaKnown RBP8.1□□□□□ -1.11
SHB17YKR043C RRT7Q07829 113 aa8.1□□□□□ -1.11
SHB17YKR043C MRPL23Q12487 163 aaPredicted RBP8.1□□□□□ -1.11
SHB17YKR043C YHR213W-AQ8TGT4 77 aa8.1□□□□□ -1.11
SHB17YKR043C TRP4P07285 380 aaPredicted RBP8.09□□□□□ -1.11
SHB17YKR043C CKS1P20486 150 aaKnown RBP8.09□□□□□ -1.11
SHB17YKR043C MRPL38P35996 138 aaPredicted RBP8.09□□□□□ -1.11
SHB17YKR043C YPT31P38555 223 aaKnown RBP8.09□□□□□ -1.11
SHB17YKR043C RPA43P46669 326 aa8.09□□□□□ -1.11
SHB17YKR043C DYN2Q02647 92 aa8.09□□□□□ -1.11
SHB17YKR043C ATP14Q12349 124 aa8.09□□□□□ -1.11
SHB17YKR043C AIM45Q12480 344 aaKnown RBP8.09□□□□□ -1.11
SHB17YKR043C COA2Q3E823 68 aa8.09□□□□□ -1.11
SHB17YKR043C URA5P13298 226 aaKnown RBP8.08□□□□□ -1.12
SHB17YKR043C ACB1P31787 87 aa8.08□□□□□ -1.12
SHB17YKR043C YPS1P32329 569 aa8.08□□□□□ -1.12
SHB17YKR043C COX15P40086 486 aa8.08□□□□□ -1.12
SHB17YKR043C JAC1P53193 184 aa8.08□□□□□ -1.12
SHB17YKR043C GPI15P53961 229 aa8.08□□□□□ -1.12
SHB17YKR043C ISN1Q99312 450 aa8.08□□□□□ -1.12
SHB17YKR043C SEC22P22214 214 aa8.07□□□□□ -1.12
SHB17YKR043C YMR090WQ04304 227 aaKnown RBP8.07□□□□□ -1.12
SHB17YKR043C IRC23Q08416 157 aa8.07□□□□□ -1.12
SHB17YKR043C YPL264CQ08980 353 aa8.07□□□□□ -1.12
SHB17YKR043C RAD28Q12021 506 aa8.07□□□□□ -1.12
SHB17YKR043C YLR146W-AQ2V2P1 62 aa8.07□□□□□ -1.12
SHB17YKR043C ERG25P53045 309 aa8.06□□□□□ -1.12
SHB17YKR043C TOS8P53147 276 aa8.06□□□□□ -1.12
SHB17YKR043C PKP2P53170 491 aa8.06□□□□□ -1.12
SHB17YKR043C HCH1P53834 153 aa8.06□□□□□ -1.12
SHB17YKR043C ACT1P60010 375 aaKnown RBP8.06□□□□□ -1.12
SHB17YKR043C ERP1Q05359 219 aaKnown RBP8.06□□□□□ -1.12
SHB17YKR043C YPS3Q12303 508 aa8.06□□□□□ -1.12
SHB17YKR043C PDC2P32896 925 aa8.05□□□□□ -1.12
SHB17YKR043C RTC3P38804 111 aaPredicted RBP8.05□□□□□ -1.12
SHB17YKR043C NSA2P40078 261 aaKnown RBP8.05□□□□□ -1.12
SHB17YKR043C TIM44Q01852 431 aa8.05□□□□□ -1.12
SHB17YKR043C FRQ1Q06389 190 aa8.05□□□□□ -1.12
SHB17YKR043C YGL194C-AQ2V2P6 80 aa8.05□□□□□ -1.12
SHB17YKR043C MRP2P10663 115 aaPredicted RBP8.04□□□□□ -1.12
SHB17YKR043C MAG1P22134 296 aaKnown RBP8.04□□□□□ -1.12
SHB17YKR043C SLM6P38343 150 aa8.04□□□□□ -1.12
SHB17YKR043C WSS1P38838 269 aa8.04□□□□□ -1.12
SHB17YKR043C YEA6P39953 335 aa8.04□□□□□ -1.12
SHB17YKR043C PNC1P53184 216 aaKnown RBP8.04□□□□□ -1.12
SHB17YKR043C YGR219WP53307 113 aa8.04□□□□□ -1.12
SHB17YKR043C POC4Q12245 148 aaPredicted RBP8.04□□□□□ -1.12
SHB17YKR043C CNB1P25296 175 aa8.03□□□□□ -1.12
SHB17YKR043C YAR068WP39564 161 aa8.03□□□□□ -1.12
SHB17YKR043C YJR111CP47148 283 aaKnown RBP8.03□□□□□ -1.12
SHB17YKR043C PDR17P53844 350 aa8.03□□□□□ -1.12
SHB17YKR043C DCS1Q06151 350 aa8.03□□□□□ -1.12
SHB17YKR043C PRM3Q08931 133 aa8.03□□□□□ -1.12
SHB17YKR043C PET494P07390 489 aaPredicted RBP8.02□□□□□ -1.13
SHB17YKR043C MRS3P10566 314 aa8.02□□□□□ -1.13
SHB17YKR043C FCY2P17064 533 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 86.6 ms