RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASH1	YKL185W	HHT1	P61830	136 aa		4.81	□□□□□ -1.64
ASH1	YKL185W	SNP1	Q00916	300 aa	Predicted RBP	4.81	□□□□□ -1.64
ASH1	YKL185W	NAT3	Q06504	195 aa		4.81	□□□□□ -1.64
ASH1	YKL185W	MCH1	Q07376	486 aa		4.81	□□□□□ -1.64
ASH1	YKL185W	IRC19	Q07843	230 aa		4.81	□□□□□ -1.64
ASH1	YKL185W	MCH4	Q08268	501 aa		4.81	□□□□□ -1.64
ASH1	YKL185W	PRP46	Q12417	451 aa	Predicted RBP	4.81	□□□□□ -1.64
ASH1	YKL185W	BLM10	P43583	2143 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	FMP49	A0A023PZB3	126 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	ADH2	P00331	348 aa	Known RBP	4.8	□□□□□ -1.64
ASH1	YKL185W	PRE1	P22141	198 aa	Known RBP	4.8	□□□□□ -1.64
ASH1	YKL185W	AIM17	P23180	465 aa	Known RBP	4.8	□□□□□ -1.64
ASH1	YKL185W	ERV1	P27882	189 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	DAL3	P32459	195 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	HSP150	P32478	413 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	AIM29	P36154	155 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	YER188W	P40103	239 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	CFD1	P40558	293 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	YPS6	P40583	537 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	SNO3	P43544	222 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	TTI2	P47168	421 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	HSV2	P50079	448 aa	Predicted RBP	4.8	□□□□□ -1.64
ASH1	YKL185W	YMR210W	Q03649	449 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	CTS2	Q06350	511 aa		4.8	□□□□□ -1.64
ASH1	YKL185W	COX2	P00410	251 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	COX5B	P00425	151 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	ARF1	P11076	181 aa	Known RBP	4.79	□□□□□ -1.64
ASH1	YKL185W	YCR006C	P25350	157 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	MIX23	P38162	196 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	LOC1	P43586	204 aa	Predicted RBP	4.79	□□□□□ -1.64
ASH1	YKL185W	RIB4	P50861	169 aa	Predicted RBP	4.79	□□□□□ -1.64
ASH1	YKL185W	PDR17	P53844	350 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	HRI1	Q05905	244 aa	Known RBP	4.79	□□□□□ -1.64
ASH1	YKL185W	YRA1	Q12159	226 aa	Known RBP	4.79	□□□□□ -1.64
ASH1	YKL185W	HUT1	Q12520	339 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	TAD3	Q9URQ3	322 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	FMP27	Q06179	2628 aa		4.79	□□□□□ -1.64
ASH1	YKL185W	SEC16	P48415	2195 aa	Known RBP	4.79	□□□□□ -1.64
ASH1	YKL185W	MES1	P00958	751 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	OCH1	P31755	480 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	AME1	P38313	324 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	YMR262W	P38430	313 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	RPB11	P38902	120 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	POP2	P39008	433 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	PAC2	P39937	518 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	YER134C	P40081	178 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	CUP9	P41817	306 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	RPL21A	Q02753	160 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	YDR102C	Q03864	110 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	DIC1	Q06143	298 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	YLR179C	Q06252	201 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	YPR071W	Q12346	211 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	RPL21B	Q12672	160 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	HUG1	Q6Q5K6	68 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	YLR365W	Q7LIF2	110 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	SPO7	P18410	259 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	RNA15	P25299	296 aa	Predicted RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	DOG1	P38774	246 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	RPS26A	P39938	119 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	RPS26B	P39939	119 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	YND1	P40009	630 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	UPS3	Q04006	179 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	YPR147C	Q06522	304 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	IZH3	Q07959	543 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	PAU23	Q07987	124 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	YPL264C	Q08980	353 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	TPT1	Q12272	230 aa	Known RBP	4.78	□□□□□ -1.64
ASH1	YKL185W	PAU17	Q12370	124 aa		4.78	□□□□□ -1.64
ASH1	YKL185W	HFA1	P32874	2273 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YDR157W	A0A023PZE8	133 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	SCO1	P23833	295 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	SPS18	P32572	300 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	UTR5	P32630	166 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	QDR3	P38227	689 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	POP7	P38291	140 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	CTK2	P46962	323 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YGR126W	P53274	230 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YPL077C	Q02831	240 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	IZH1	Q03419	316 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YMR007W	Q03675	126 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YDR286C	Q05530	114 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YOL024W	Q08172	172 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	YDL157C	Q12082	118 aa		4.77	□□□□□ -1.65
ASH1	YKL185W	SUA7	P29055	345 aa	Predicted RBP	4.76	□□□□□ -1.65
ASH1	YKL185W	RPB7	P34087	171 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YKL187C	P34231	750 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	PAU16	P35994	123 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	MIC26	P50087	233 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	THG1	P53215	237 aa	Known RBP	4.76	□□□□□ -1.65
ASH1	YKL185W	NCE103	P53615	221 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	DUG3	P53871	357 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	ALG6	Q12001	544 aa	Known RBP	4.76	□□□□□ -1.65
ASH1	YKL185W	USV1	Q12132	391 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YPR108W-A	Q3E7B3	70 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	CDC36	P06100	191 aa	Predicted RBP	4.76	□□□□□ -1.65
ASH1	YKL185W	QCR9	P22289	66 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YGR269W	P40326	108 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	YJL028W	P47062	111 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	CRH1	P53301	507 aa		4.76	□□□□□ -1.65
ASH1	YKL185W	CGI121	Q03705	181 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms