RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SWD3P38123 315 aa1.81□□□□□ -2.12
UFD4YKL010C XPT1P47165 209 aa1.81□□□□□ -2.12
UFD4YKL010C YGL114WP53134 725 aa1.81□□□□□ -2.12
UFD4YKL010C ATG4P53867 494 aa1.81□□□□□ -2.12
UFD4YKL010C ATP19P81451 68 aa1.81□□□□□ -2.12
UFD4YKL010C ACS1Q01574 713 aa1.81□□□□□ -2.12
UFD4YKL010C MRL1Q06815 381 aa1.81□□□□□ -2.12
UFD4YKL010C HUG1Q6Q5K6 68 aa1.81□□□□□ -2.12
UFD4YKL010C COX5BP00425 151 aa1.8□□□□□ -2.12
UFD4YKL010C MRS4P23500 304 aa1.8□□□□□ -2.12
UFD4YKL010C PAC2P39937 518 aa1.8□□□□□ -2.12
UFD4YKL010C GET2P40056 285 aa1.8□□□□□ -2.12
UFD4YKL010C CUP9P41817 306 aa1.8□□□□□ -2.12
UFD4YKL010C SNO3P43544 222 aa1.8□□□□□ -2.12
UFD4YKL010C HSV2P50079 448 aaPredicted RBP1.8□□□□□ -2.12
UFD4YKL010C CPD1P53314 239 aa1.8□□□□□ -2.12
UFD4YKL010C PAU1P0CE88 120 aa1.8□□□□□ -2.12
UFD4YKL010C PAU14P0CE89 120 aa1.8□□□□□ -2.12
UFD4YKL010C PAU6P0CE90 120 aa1.8□□□□□ -2.12
UFD4YKL010C PAU18P0CE91 120 aa1.8□□□□□ -2.12
UFD4YKL010C PAU8P0CE92 120 aa1.8□□□□□ -2.12
UFD4YKL010C PAU11P0CE93 120 aa1.8□□□□□ -2.12
UFD4YKL010C HEM13P11353 328 aaKnown RBP1.8□□□□□ -2.12
UFD4YKL010C QRI5P32344 111 aa1.8□□□□□ -2.12
UFD4YKL010C PAU13P38725 120 aa1.8□□□□□ -2.12
UFD4YKL010C LSM4P40070 187 aaKnown RBP1.8□□□□□ -2.12
UFD4YKL010C SHO1P40073 367 aa1.8□□□□□ -2.12
UFD4YKL010C FLX1P40464 311 aa1.8□□□□□ -2.12
UFD4YKL010C SAS2P40963 338 aa1.8□□□□□ -2.12
UFD4YKL010C YGR017WP53210 297 aa1.8□□□□□ -2.12
UFD4YKL010C ALG12P53730 551 aa1.8□□□□□ -2.12
UFD4YKL010C BOR1P53838 576 aa1.8□□□□□ -2.12
UFD4YKL010C VPS28Q02767 242 aa1.8□□□□□ -2.12
UFD4YKL010C PAU10Q03050 120 aa1.8□□□□□ -2.12
UFD4YKL010C SDC1Q03323 175 aa1.8□□□□□ -2.12
UFD4YKL010C PAU20Q08322 120 aa1.8□□□□□ -2.12
UFD4YKL010C YOR186WQ08560 144 aa1.8□□□□□ -2.12
UFD4YKL010C ATG5Q12380 294 aa1.8□□□□□ -2.12
UFD4YKL010C PAU9Q3E770 120 aa1.8□□□□□ -2.12
UFD4YKL010C RPL25P04456 142 aaKnown RBP1.8□□□□□ -2.12
UFD4YKL010C YBL010CP32788 280 aa1.8□□□□□ -2.12
UFD4YKL010C ALK2P32789 676 aaPredicted RBP1.8□□□□□ -2.12
UFD4YKL010C MNS1P32906 549 aa1.8□□□□□ -2.12
UFD4YKL010C YKL187CP34231 750 aa1.8□□□□□ -2.12
UFD4YKL010C YKL107WP34251 309 aa1.8□□□□□ -2.12
UFD4YKL010C RPS26AP39938 119 aaKnown RBP1.8□□□□□ -2.12
UFD4YKL010C YIL169CP40442 995 aa1.8□□□□□ -2.12
UFD4YKL010C TAF4P50105 388 aa1.8□□□□□ -2.12
UFD4YKL010C BRP1P53194 125 aa1.8□□□□□ -2.12
UFD4YKL010C RBS1Q05672 457 aaKnown RBP1.8□□□□□ -2.12
UFD4YKL010C GAT3Q07928 141 aa1.8□□□□□ -2.12
UFD4YKL010C FIT3Q08907 204 aa1.8□□□□□ -2.12
UFD4YKL010C ATP5P09457 212 aa1.79□□□□□ -2.12
UFD4YKL010C SNF5P18480 905 aa1.79□□□□□ -2.12
UFD4YKL010C TOM40P23644 387 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C TIP1P27654 210 aaPredicted RBP1.79□□□□□ -2.12
UFD4YKL010C PMU1P36069 295 aa1.79□□□□□ -2.12
UFD4YKL010C FLO5P38894 1075 aa1.79□□□□□ -2.12
UFD4YKL010C NIT2P47016 307 aa1.79□□□□□ -2.12
UFD4YKL010C ARP3P47117 449 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C CGR1P53188 120 aa1.79□□□□□ -2.12
UFD4YKL010C LST7P53237 242 aa1.79□□□□□ -2.12
UFD4YKL010C RPS22BQ3E7Y3 130 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C RPL31AP0C2H8 113 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C RPL31BP0C2H9 113 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C DAL82P21705 255 aa1.79□□□□□ -2.12
UFD4YKL010C KRR1P25586 316 aaPredicted RBP1.79□□□□□ -2.12
UFD4YKL010C YHR210CP38893 341 aa1.79□□□□□ -2.12
UFD4YKL010C ECO1P43605 281 aa1.79□□□□□ -2.12
UFD4YKL010C PDR17P53844 350 aa1.79□□□□□ -2.12
UFD4YKL010C PAM18Q07914 168 aa1.79□□□□□ -2.12
UFD4YKL010C YOL024WQ08172 172 aa1.79□□□□□ -2.12
UFD4YKL010C YLR146W-AQ2V2P1 62 aa1.79□□□□□ -2.12
UFD4YKL010C HMRA1P0CY11 126 aa1.79□□□□□ -2.12
UFD4YKL010C RNA15P25299 296 aaPredicted RBP1.79□□□□□ -2.12
UFD4YKL010C MTC7P32633 139 aa1.79□□□□□ -2.12
UFD4YKL010C MRPS5P33759 307 aa1.79□□□□□ -2.12
UFD4YKL010C MTR2P34232 184 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C CSH1P38287 376 aa1.79□□□□□ -2.12
UFD4YKL010C RTC3P38804 111 aaPredicted RBP1.79□□□□□ -2.12
UFD4YKL010C YJL213WP40896 331 aa1.79□□□□□ -2.12
UFD4YKL010C NSE4P43124 402 aa1.79□□□□□ -2.12
UFD4YKL010C TAX4P47030 604 aa1.79□□□□□ -2.12
UFD4YKL010C CRH1P53301 507 aa1.79□□□□□ -2.12
UFD4YKL010C TEX1P53851 422 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C PDR16P53860 351 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C YNL046WP53956 172 aa1.79□□□□□ -2.12
UFD4YKL010C ATX2Q12067 313 aa1.79□□□□□ -2.12
UFD4YKL010C ATP10P18496 279 aa1.79□□□□□ -2.12
UFD4YKL010C QDR3P38227 689 aa1.79□□□□□ -2.12
UFD4YKL010C YER084WP40057 128 aa1.79□□□□□ -2.12
UFD4YKL010C RPN14P53196 417 aa1.79□□□□□ -2.12
UFD4YKL010C ADD37Q03233 198 aa1.79□□□□□ -2.12
UFD4YKL010C FCY22Q12119 530 aa1.79□□□□□ -2.12
UFD4YKL010C YDL180WQ12301 547 aa1.79□□□□□ -2.12
UFD4YKL010C PAA1Q12447 191 aaKnown RBP1.79□□□□□ -2.12
UFD4YKL010C YNR034W-AQ3E841 98 aa1.79□□□□□ -2.12
UFD4YKL010C ACC1Q00955 2233 aaKnown RBP1.78□□□□□ -2.12
UFD4YKL010C PCL1P24867 279 aa1.78□□□□□ -2.12
UFD4YKL010C PIG2P40187 538 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 120.8 ms