RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A SFK1P35735 353 aa1.96□□□□□ -2.1
SFT1YKL006C-A SDH4P37298 181 aa1.96□□□□□ -2.1
SFT1YKL006C-A NSG1P38837 291 aa1.96□□□□□ -2.1
SFT1YKL006C-A AIM2P39721 246 aa1.96□□□□□ -2.1
SFT1YKL006C-A AVT2P39981 480 aa1.96□□□□□ -2.1
SFT1YKL006C-A YEA4P40004 342 aa1.96□□□□□ -2.1
SFT1YKL006C-A RFC2P40348 353 aa1.96□□□□□ -2.1
SFT1YKL006C-A YFL019CP43576 117 aa1.96□□□□□ -2.1
SFT1YKL006C-A GPI14P47088 403 aaKnown RBP1.96□□□□□ -2.1
SFT1YKL006C-A LSM3P57743 89 aaKnown RBP1.96□□□□□ -2.1
SFT1YKL006C-A TMA20P89886 181 aaPredicted RBP1.96□□□□□ -2.1
SFT1YKL006C-A THI74Q04083 370 aa1.96□□□□□ -2.1
SFT1YKL006C-A NAT3Q06504 195 aa1.96□□□□□ -2.1
SFT1YKL006C-A YOL014WQ08110 124 aa1.96□□□□□ -2.1
SFT1YKL006C-A DAS2Q12084 232 aa1.96□□□□□ -2.1
SFT1YKL006C-A MSW1P04803 379 aa1.95□□□□□ -2.1
SFT1YKL006C-A UBI4P0CG63 381 aaKnown RBP1.95□□□□□ -2.1
SFT1YKL006C-A RPL2AP0CX45 254 aaKnown RBP1.95□□□□□ -2.1
SFT1YKL006C-A RPL2BP0CX46 254 aaKnown RBP1.95□□□□□ -2.1
SFT1YKL006C-A VMA11P32842 164 aa1.95□□□□□ -2.1
SFT1YKL006C-A PAN3P36102 679 aaPredicted RBP1.95□□□□□ -2.1
SFT1YKL006C-A YAP3P38749 330 aa1.95□□□□□ -2.1
SFT1YKL006C-A IPI1P38803 334 aaPredicted RBP1.95□□□□□ -2.1
SFT1YKL006C-A YHR180WP38868 163 aa1.95□□□□□ -2.1
SFT1YKL006C-A YER134CP40081 178 aa1.95□□□□□ -2.1
SFT1YKL006C-A TTI2P47168 421 aa1.95□□□□□ -2.1
SFT1YKL006C-A DSK2P48510 373 aa1.95□□□□□ -2.1
SFT1YKL006C-A YDR476CQ03362 224 aa1.95□□□□□ -2.1
SFT1YKL006C-A YDL180WQ12301 547 aa1.95□□□□□ -2.1
SFT1YKL006C-A YML100W-AQ8TGT0 57 aa1.95□□□□□ -2.1
SFT1YKL006C-A YAR023CD6VPM8 179 aa1.94□□□□□ -2.1
SFT1YKL006C-A CPA1P07258 411 aaKnown RBP1.94□□□□□ -2.1
SFT1YKL006C-A KRE1P17260 313 aa1.94□□□□□ -2.1
SFT1YKL006C-A IDP1P21954 428 aaKnown RBP1.94□□□□□ -2.1
SFT1YKL006C-A MIG1P27705 504 aa1.94□□□□□ -2.1
SFT1YKL006C-A UPS2P35200 230 aa1.94□□□□□ -2.1
SFT1YKL006C-A CYC2P38909 366 aa1.94□□□□□ -2.1
SFT1YKL006C-A GIM4P40005 111 aaKnown RBP1.94□□□□□ -2.1
SFT1YKL006C-A VTC1P40046 129 aaRIP-Chip data1.94□□□□□ -2.1not detected
SFT1YKL006C-A GVP36P40531 326 aaKnown RBP1.94□□□□□ -2.1
SFT1YKL006C-A MNN5P46982 586 aa1.94□□□□□ -2.1
SFT1YKL006C-A YGL101WP53144 215 aa1.94□□□□□ -2.1
SFT1YKL006C-A ORM1P53224 222 aa1.94□□□□□ -2.1
SFT1YKL006C-A YGR042WP53227 271 aa1.94□□□□□ -2.1
SFT1YKL006C-A YDR274CP87283 123 aa1.94□□□□□ -2.1
SFT1YKL006C-A NEJ1Q06148 342 aa1.94□□□□□ -2.1
SFT1YKL006C-A YLR412C-AQ3E742 68 aa1.94□□□□□ -2.1
SFT1YKL006C-A ODC2Q99297 307 aa1.94□□□□□ -2.1
SFT1YKL006C-A TAF2P23255 1407 aa1.93□□□□□ -2.1
SFT1YKL006C-A PEX34P25584 144 aa1.93□□□□□ -2.1
SFT1YKL006C-A FCY21P40039 528 aa1.93□□□□□ -2.1
SFT1YKL006C-A PGD1P40356 397 aa1.93□□□□□ -2.1
SFT1YKL006C-A APQ12P40532 138 aa1.93□□□□□ -2.1
SFT1YKL006C-A DOC1P53068 250 aa1.93□□□□□ -2.1
SFT1YKL006C-A MIX17Q03667 156 aa1.93□□□□□ -2.1
SFT1YKL006C-A PKR1Q03880 122 aaKnown RBP1.93□□□□□ -2.1
SFT1YKL006C-A RPL26AP05743 127 aaKnown RBP1.92□□□□□ -2.1
SFT1YKL006C-A RPL30P14120 105 aaKnown RBP1.92□□□□□ -2.1
SFT1YKL006C-A SCM4P32564 187 aa1.92□□□□□ -2.1
SFT1YKL006C-A UMP1P38293 148 aa1.92□□□□□ -2.1
SFT1YKL006C-A YGR201CP42936 225 aa1.92□□□□□ -2.1
SFT1YKL006C-A YJR015WP47090 510 aa1.92□□□□□ -2.1
SFT1YKL006C-A XPT1P47165 209 aa1.92□□□□□ -2.1
SFT1YKL006C-A YJR146WP47174 117 aa1.92□□□□□ -2.1
SFT1YKL006C-A YGL204CP53089 101 aa1.92□□□□□ -2.1
SFT1YKL006C-A RPL26BP53221 127 aaKnown RBP1.92□□□□□ -2.1
SFT1YKL006C-A MPC3P53311 146 aa1.92□□□□□ -2.1
SFT1YKL006C-A YMR099CQ03161 297 aaKnown RBP1.92□□□□□ -2.1
SFT1YKL006C-A RAV2Q03956 351 aa1.92□□□□□ -2.1
SFT1YKL006C-A POR1P04840 283 aaKnown RBP1.91□□□□□ -2.1
SFT1YKL006C-A PBI2P0CT04 75 aaKnown RBP1.91□□□□□ -2.1
SFT1YKL006C-A RSA4P25382 515 aaKnown RBP1.91□□□□□ -2.1
SFT1YKL006C-A CPR5P35176 225 aa1.91□□□□□ -2.1
SFT1YKL006C-A YBR285WP38354 144 aa1.91□□□□□ -2.1
SFT1YKL006C-A YHL026CP38740 315 aa1.91□□□□□ -2.1
SFT1YKL006C-A FYV4P38783 130 aaPredicted RBP1.91□□□□□ -2.1
SFT1YKL006C-A YNL200CP40165 246 aaKnown RBP1.91□□□□□ -2.1
SFT1YKL006C-A DLS1P40366 167 aa1.91□□□□□ -2.1
SFT1YKL006C-A ERJ5P43613 295 aaPredicted RBP1.91□□□□□ -2.1
SFT1YKL006C-A RBL2P48606 106 aaKnown RBP1.91□□□□□ -2.1
SFT1YKL006C-A VPS71Q03433 280 aa1.91□□□□□ -2.1
SFT1YKL006C-A ATO3Q12359 275 aa1.91□□□□□ -2.1
SFT1YKL006C-A STP22P25604 385 aa1.9□□□□□ -2.11
SFT1YKL006C-A SNC2P33328 115 aa1.9□□□□□ -2.11
SFT1YKL006C-A RPL33BP41056 107 aaKnown RBP1.9□□□□□ -2.11
SFT1YKL006C-A YJL027CP47063 138 aaPredicted RBP1.9□□□□□ -2.11
SFT1YKL006C-A EAF6P47128 113 aa1.9□□□□□ -2.11
SFT1YKL006C-A YNR077CP53758 84 aa1.9□□□□□ -2.11
SFT1YKL006C-A HHT1P61830 136 aa1.9□□□□□ -2.11
SFT1YKL006C-A YMR320WQ04897 101 aa1.9□□□□□ -2.11
SFT1YKL006C-A FYV12Q08559 129 aa1.9□□□□□ -2.11
SFT1YKL006C-A FSF1Q12029 327 aaKnown RBP1.9□□□□□ -2.11
SFT1YKL006C-A ATP5P09457 212 aa1.89□□□□□ -2.11
SFT1YKL006C-A FIP1P45976 327 aa1.89□□□□□ -2.11
SFT1YKL006C-A YNR062CP53748 327 aa1.89□□□□□ -2.11
SFT1YKL006C-A DIG2Q03373 323 aaKnown RBP1.89□□□□□ -2.11
SFT1YKL006C-A GAL83Q04739 417 aa1.89□□□□□ -2.11
SFT1YKL006C-A TIR1P10863 254 aa1.88□□□□□ -2.11
SFT1YKL006C-A NSP1P14907 823 aaKnown RBP1.88□□□□□ -2.11
SFT1YKL006C-A YET1P35723 206 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 1484 ms