RNA–Protein interactions for RNA: YIR044C

YIR044C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR044C, Length 186 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR044CYIR044C YER188C-AP0C0V2 99 aa0.28□□□□□ -2.36
YIR044CYIR044C SHE2P36068 246 aaKnown RBP RIP-Chip data0.28□□□□□ -2.36not detected
YIR044CYIR044C YER034WP40022 185 aaKnown RBP0.28□□□□□ -2.36
YIR044CYIR044C YRB1P41920 201 aaKnown RBP0.28□□□□□ -2.36
YIR044CYIR044C SER2P42941 309 aa0.28□□□□□ -2.36
YIR044CYIR044C CWC27Q02770 301 aa0.28□□□□□ -2.36
YIR044CYIR044C SLH1P53327 1967 aaKnown RBP0.27□□□□□ -2.37
YIR044CYIR044C MAG1P22134 296 aaKnown RBP0.27□□□□□ -2.37
YIR044CYIR044C YCR090CP25654 182 aaKnown RBP0.27□□□□□ -2.37
YIR044CYIR044C YHL042WP38729 150 aa0.27□□□□□ -2.37
YIR044CYIR044C EDC3P39998 551 aaKnown RBP0.27□□□□□ -2.37
YIR044CYIR044C NOP19P53317 196 aaPredicted RBP0.27□□□□□ -2.37
YIR044CYIR044C PGA2P53903 129 aa0.27□□□□□ -2.37
YIR044CYIR044C TIM11P81449 96 aaPredicted RBP0.27□□□□□ -2.37
YIR044CYIR044C MET31Q03081 177 aa0.27□□□□□ -2.37
YIR044CYIR044C BNA7Q04066 261 aa0.27□□□□□ -2.37
YIR044CYIR044C PST2Q12335 198 aaKnown RBP0.27□□□□□ -2.37
YIR044CYIR044C COA3Q3E7B2 85 aa0.27□□□□□ -2.37
YIR044CYIR044C ODC2Q99297 307 aa0.27□□□□□ -2.37
YIR044CYIR044C IGO2Q9P305 131 aa0.27□□□□□ -2.37
YIR044CYIR044C YAR023CD6VPM8 179 aa0.26□□□□□ -2.37
YIR044CYIR044C TIR1P10863 254 aa0.26□□□□□ -2.37
YIR044CYIR044C APA2P22108 325 aa0.26□□□□□ -2.37
YIR044CYIR044C CNB1P25296 175 aa0.26□□□□□ -2.37
YIR044CYIR044C CPR5P35176 225 aa0.26□□□□□ -2.37
YIR044CYIR044C GPI14P47088 403 aaKnown RBP0.26□□□□□ -2.37
YIR044CYIR044C SBH1P52870 82 aa0.26□□□□□ -2.37
YIR044CYIR044C MMS2P53152 137 aa0.26□□□□□ -2.37
YIR044CYIR044C YNL033WP53964 284 aa0.26□□□□□ -2.37
YIR044CYIR044C YMR295CQ03559 197 aa0.26□□□□□ -2.37
YIR044CYIR044C YMR253CQ04835 414 aa0.26□□□□□ -2.37
YIR044CYIR044C NAT3Q06504 195 aa0.26□□□□□ -2.37
YIR044CYIR044C PRP11Q07350 266 aaPredicted RBP0.26□□□□□ -2.37
YIR044CYIR044C RAD9P14737 1309 aa0.25□□□□□ -2.37
YIR044CYIR044C MGT1P26188 188 aa0.25□□□□□ -2.37
YIR044CYIR044C RPB7P34087 171 aa0.25□□□□□ -2.37
YIR044CYIR044C AIM2P39721 246 aa0.25□□□□□ -2.37
YIR044CYIR044C GCN20P43535 752 aaKnown RBP0.25□□□□□ -2.37
YIR044CYIR044C THG1P53215 237 aaKnown RBP0.25□□□□□ -2.37
YIR044CYIR044C YMR007WQ03675 126 aa0.25□□□□□ -2.37
YIR044CYIR044C NCB2Q92317 146 aa0.25□□□□□ -2.37
YIR044CYIR044C QCR7P00128 127 aa0.24□□□□□ -2.37
YIR044CYIR044C SEN2P16658 377 aa0.24□□□□□ -2.37
YIR044CYIR044C YHL037CP38733 133 aa0.24□□□□□ -2.37
YIR044CYIR044C YFL051CP43552 160 aa0.24□□□□□ -2.37
YIR044CYIR044C DAD4P69851 72 aa0.24□□□□□ -2.37
YIR044CYIR044C AIM36Q03798 255 aa0.24□□□□□ -2.37
YIR044CYIR044C UPS3Q04006 179 aa0.24□□□□□ -2.37
YIR044CYIR044C ARO80Q04052 950 aa0.24□□□□□ -2.37
YIR044CYIR044C SHH3Q04487 196 aa0.24□□□□□ -2.37
YIR044CYIR044C FUS2Q05670 677 aa0.24□□□□□ -2.37
YIR044CYIR044C TRX3P25372 127 aa0.23□□□□□ -2.37
YIR044CYIR044C STP22P25604 385 aa0.23□□□□□ -2.37
YIR044CYIR044C ARO7P32178 256 aa0.23□□□□□ -2.37
YIR044CYIR044C ASF2P32448 525 aaPredicted RBP0.23□□□□□ -2.37
YIR044CYIR044C GSP2P32836 220 aaKnown RBP0.23□□□□□ -2.37
YIR044CYIR044C YKT6P36015 200 aaKnown RBP0.23□□□□□ -2.37
YIR044CYIR044C MTW1P39731 289 aa0.23□□□□□ -2.37
YIR044CYIR044C HPA3P39979 161 aa0.23□□□□□ -2.37
YIR044CYIR044C SPC25P40014 221 aa0.23□□□□□ -2.37
YIR044CYIR044C YER134CP40081 178 aa0.23□□□□□ -2.37
YIR044CYIR044C CUP9P41817 306 aa0.23□□□□□ -2.37
YIR044CYIR044C YFL019CP43576 117 aa0.23□□□□□ -2.37
YIR044CYIR044C YNL184CP53876 108 aa0.23□□□□□ -2.37
YIR044CYIR044C BRX1Q08235 291 aaKnown RBP0.23□□□□□ -2.37
YIR044CYIR044C RUD3Q12234 484 aaKnown RBP0.23□□□□□ -2.37
YIR044CYIR044C TAR1Q8TGM6 124 aa0.23□□□□□ -2.37
YIR044CYIR044C ACC1Q00955 2233 aaKnown RBP0.23□□□□□ -2.37
YIR044CYIR044C YPK2P18961 677 aa0.22□□□□□ -2.37
YIR044CYIR044C IDP1P21954 428 aaKnown RBP0.22□□□□□ -2.37
YIR044CYIR044C TAH1P25638 111 aaPredicted RBP0.22□□□□□ -2.37
YIR044CYIR044C SKI6P46948 246 aaPredicted RBP0.22□□□□□ -2.37
YIR044CYIR044C UBC12P52491 188 aa0.22□□□□□ -2.37
YIR044CYIR044C YGL235WP53071 178 aa0.22□□□□□ -2.37
YIR044CYIR044C VPS71Q03433 280 aa0.22□□□□□ -2.37
YIR044CYIR044C ELP6Q04868 273 aa0.22□□□□□ -2.37
YIR044CYIR044C GRE1Q08969 168 aa0.22□□□□□ -2.37
YIR044CYIR044C SNF4P12904 322 aa0.21□□□□□ -2.38
YIR044CYIR044C STF2P16965 84 aa0.21□□□□□ -2.38
YIR044CYIR044C AHT1P29589 182 aa0.21□□□□□ -2.38
YIR044CYIR044C ECM4P36156 370 aa0.21□□□□□ -2.38
YIR044CYIR044C PIR1Q03178 341 aa0.21□□□□□ -2.38
YIR044CYIR044C AVO2Q04749 426 aa0.21□□□□□ -2.38
YIR044CYIR044C DYN3Q04949 312 aa0.21□□□□□ -2.38
YIR044CYIR044C YMR226CQ05016 267 aaKnown RBP0.21□□□□□ -2.38
YIR044CYIR044C GRX8Q05926 109 aa0.21□□□□□ -2.38
YIR044CYIR044C NOC4Q06512 552 aaPredicted RBP0.21□□□□□ -2.38
YIR044CYIR044C YOL024WQ08172 172 aa0.21□□□□□ -2.38
YIR044CYIR044C ABP140Q08641 628 aaKnown RBP0.21□□□□□ -2.38
YIR044CYIR044C GET4Q12125 312 aa0.21□□□□□ -2.38
YIR044CYIR044C DUR1,2P32528 1835 aaKnown RBP0.21□□□□□ -2.38
YIR044CYIR044C PHO85P17157 305 aa0.2□□□□□ -2.38
YIR044CYIR044C RPB4P20433 221 aaPredicted RBP0.2□□□□□ -2.38
YIR044CYIR044C YCR023CP25351 611 aa0.2□□□□□ -2.38
YIR044CYIR044C NTG1P31378 399 aa0.2□□□□□ -2.38
YIR044CYIR044C SFK1P35735 353 aa0.2□□□□□ -2.38
YIR044CYIR044C PDS1P40316 373 aaPredicted RBP0.2□□□□□ -2.38
YIR044CYIR044C MPM1P40364 252 aa0.2□□□□□ -2.38
YIR044CYIR044C ALB1P47019 175 aaPredicted RBP0.2□□□□□ -2.38
YIR044CYIR044C SOL1P50278 321 aa0.2□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms