RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W MOB1P40484 314 aa-0.56□□□□□ -2.5
APQ12YIL040W ARP3P47117 449 aaKnown RBP-0.56□□□□□ -2.5
APQ12YIL040W BXI1P48558 297 aa-0.56□□□□□ -2.5
APQ12YIL040W BRR6P53062 197 aa-0.56□□□□□ -2.5
APQ12YIL040W YGL230CP53074 147 aa-0.56□□□□□ -2.5
APQ12YIL040W MRPL50P53724 139 aa-0.56□□□□□ -2.5
APQ12YIL040W PDR17P53844 350 aa-0.56□□□□□ -2.5
APQ12YIL040W FYV6P53913 173 aa-0.56□□□□□ -2.5
APQ12YIL040W COG5P53951 403 aa-0.56□□□□□ -2.5
APQ12YIL040W YNL033WP53964 284 aa-0.56□□□□□ -2.5
APQ12YIL040W HNT1Q04344 158 aaKnown RBP-0.56□□□□□ -2.5
APQ12YIL040W YHR214C-EQ8TGK0 99 aa-0.56□□□□□ -2.5
APQ12YIL040W ROM2P51862 1356 aaKnown RBP-0.57□□□□□ -2.5
APQ12YIL040W OPI1P21957 404 aa-0.57□□□□□ -2.5
APQ12YIL040W MAG1P22134 296 aaKnown RBP-0.57□□□□□ -2.5
APQ12YIL040W ERG10P41338 398 aaKnown RBP-0.57□□□□□ -2.5
APQ12YIL040W SHH3Q04487 196 aa-0.57□□□□□ -2.5
APQ12YIL040W PAM18Q07914 168 aa-0.57□□□□□ -2.5
APQ12YIL040W YIL177CP40434 1758 aa-0.57□□□□□ -2.5
APQ12YIL040W YJL225CP40889 1758 aa-0.57□□□□□ -2.5
APQ12YIL040W YAR023CD6VPM8 179 aa-0.58□□□□□ -2.5
APQ12YIL040W KIN28P06242 306 aa-0.58□□□□□ -2.5
APQ12YIL040W YCR090CP25654 182 aaKnown RBP-0.58□□□□□ -2.5
APQ12YIL040W PPA2P28239 310 aa-0.58□□□□□ -2.5
APQ12YIL040W MSN4P33749 630 aa-0.58□□□□□ -2.5
APQ12YIL040W SLM6P38343 150 aa-0.58□□□□□ -2.5
APQ12YIL040W YMR099CQ03161 297 aaKnown RBP-0.58□□□□□ -2.5
APQ12YIL040W DYN3Q04949 312 aa-0.58□□□□□ -2.5
APQ12YIL040W ATG31Q12421 196 aa-0.58□□□□□ -2.5
APQ12YIL040W TIR1P10863 254 aa-0.59□□□□□ -2.5
APQ12YIL040W SNF4P12904 322 aa-0.59□□□□□ -2.5
APQ12YIL040W YPK2P18961 677 aa-0.59□□□□□ -2.5
APQ12YIL040W MGT1P26188 188 aa-0.59□□□□□ -2.5
APQ12YIL040W ASF2P32448 525 aaPredicted RBP-0.59□□□□□ -2.5
APQ12YIL040W BMH2P34730 273 aaKnown RBP-0.59□□□□□ -2.5
APQ12YIL040W YER134CP40081 178 aa-0.59□□□□□ -2.5
APQ12YIL040W PDS1P40316 373 aaPredicted RBP-0.59□□□□□ -2.5
APQ12YIL040W RPC17P47076 161 aa-0.59□□□□□ -2.5
APQ12YIL040W MIC26P50087 233 aa-0.59□□□□□ -2.5
APQ12YIL040W MGR2Q02889 113 aa-0.59□□□□□ -2.5
APQ12YIL040W YHP1Q04116 353 aa-0.59□□□□□ -2.5
APQ12YIL040W YOR015WQ12169 119 aa-0.59□□□□□ -2.5
APQ12YIL040W FCY1Q12178 158 aa-0.59□□□□□ -2.5
APQ12YIL040W YOR342CQ12182 319 aa-0.59□□□□□ -2.5
APQ12YIL040W ADF1Q2V2Q1 113 aa-0.59□□□□□ -2.5
APQ12YIL040W YMR030W-AQ3E760 96 aa-0.59□□□□□ -2.5
APQ12YIL040W RPL25P04456 142 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W RPS22AP0C0W1 130 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W IDP1P21954 428 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W PRE1P22141 198 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W UBC6P33296 250 aaPredicted RBP-0.6□□□□□ -2.51
APQ12YIL040W HMF1P40037 129 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W POG1P40473 351 aa-0.6□□□□□ -2.51
APQ12YIL040W CIN5P40917 295 aa-0.6□□□□□ -2.51
APQ12YIL040W CUP9P41817 306 aa-0.6□□□□□ -2.51
APQ12YIL040W SER2P42941 309 aa-0.6□□□□□ -2.51
APQ12YIL040W NSE4P43124 402 aa-0.6□□□□□ -2.51
APQ12YIL040W BLM10P43583 2143 aa-0.6□□□□□ -2.51
APQ12YIL040W ALG13P53178 202 aa-0.6□□□□□ -2.51
APQ12YIL040W LSM7P53905 115 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W YMR253CQ04835 414 aa-0.6□□□□□ -2.51
APQ12YIL040W RRT8Q08219 342 aa-0.6□□□□□ -2.51
APQ12YIL040W YOR072WQ08486 104 aa-0.6□□□□□ -2.51
APQ12YIL040W RPS22BQ3E7Y3 130 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W DUR1,2P32528 1835 aaKnown RBP-0.6□□□□□ -2.51
APQ12YIL040W GCN3P14741 305 aa-0.61□□□□□ -2.51
APQ12YIL040W MAK31P23059 88 aa-0.61□□□□□ -2.51
APQ12YIL040W ADE1P27616 306 aa-0.61□□□□□ -2.51
APQ12YIL040W SSO1P32867 290 aa-0.61□□□□□ -2.51
APQ12YIL040W RIB7P33312 244 aa-0.61□□□□□ -2.51
APQ12YIL040W LDB7P38210 180 aa-0.61□□□□□ -2.51
APQ12YIL040W YHR140WP38842 239 aa-0.61□□□□□ -2.51
APQ12YIL040W MTW1P39731 289 aa-0.61□□□□□ -2.51
APQ12YIL040W BNA6P43619 295 aa-0.61□□□□□ -2.51
APQ12YIL040W SKI6P46948 246 aaPredicted RBP-0.61□□□□□ -2.51
APQ12YIL040W GPI14P47088 403 aaKnown RBP-0.61□□□□□ -2.51
APQ12YIL040W YOL107WQ12239 342 aa-0.61□□□□□ -2.51
APQ12YIL040W DGK1Q12382 290 aa-0.61□□□□□ -2.51
APQ12YIL040W SNF2P22082 1703 aa-0.61□□□□□ -2.51
APQ12YIL040W CLG1P35190 452 aa-0.62□□□□□ -2.51
APQ12YIL040W SPC25P40014 221 aa-0.62□□□□□ -2.51
APQ12YIL040W CCS1P40202 249 aaKnown RBP-0.62□□□□□ -2.51
APQ12YIL040W YNL122CP53921 115 aaPredicted RBP-0.62□□□□□ -2.51
APQ12YIL040W PIR1Q03178 341 aa-0.62□□□□□ -2.51
APQ12YIL040W NAT3Q06504 195 aa-0.62□□□□□ -2.51
APQ12YIL040W HAP2P06774 265 aa-0.63□□□□□ -2.51
APQ12YIL040W CNB1P25296 175 aa-0.63□□□□□ -2.51
APQ12YIL040W HTD2P38790 280 aaKnown RBP-0.63□□□□□ -2.51
APQ12YIL040W AIM2P39721 246 aa-0.63□□□□□ -2.51
APQ12YIL040W COX15P40086 486 aa-0.63□□□□□ -2.51
APQ12YIL040W CCC1P47818 322 aa-0.63□□□□□ -2.51
APQ12YIL040W HHT1P61830 136 aa-0.63□□□□□ -2.51
APQ12YIL040W SRL4Q03085 281 aa-0.63□□□□□ -2.51
APQ12YIL040W DML1Q03652 475 aa-0.63□□□□□ -2.51
APQ12YIL040W AVO2Q04749 426 aa-0.63□□□□□ -2.51
APQ12YIL040W KAP95Q06142 861 aaKnown RBP-0.63□□□□□ -2.51
APQ12YIL040W YOL014WQ08110 124 aa-0.63□□□□□ -2.51
APQ12YIL040W YOR034C-AQ3E735 80 aa-0.63□□□□□ -2.51
APQ12YIL040W YPR117WQ06116 2489 aa-0.63□□□□□ -2.51
APQ12YIL040W MDN1Q12019 4910 aaKnown RBP-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms