RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C HOR7Q05827 59 aa2.95□□□□□ -1.94
OTU1YFL044C NEJ1Q06148 342 aa2.95□□□□□ -1.94
OTU1YFL044C NOC4Q06512 552 aaPredicted RBP2.95□□□□□ -1.94
OTU1YFL044C ATO3Q12359 275 aa2.95□□□□□ -1.94
OTU1YFL044C YPR1Q12458 312 aa2.95□□□□□ -1.94
OTU1YFL044C FMP16Q12497 93 aa2.95□□□□□ -1.94
OTU1YFL044C PRE7P23724 241 aaKnown RBP2.94□□□□□ -1.94
OTU1YFL044C DPB2P24482 689 aaPredicted RBP2.94□□□□□ -1.94
OTU1YFL044C FUN26P31381 517 aa2.94□□□□□ -1.94
OTU1YFL044C ERG2P32352 222 aa2.94□□□□□ -1.94
OTU1YFL044C AST1P35183 429 aa2.94□□□□□ -1.94
OTU1YFL044C SFK1P35735 353 aa2.94□□□□□ -1.94
OTU1YFL044C SDH4P37298 181 aa2.94□□□□□ -1.94
OTU1YFL044C GNA1P43577 159 aaPredicted RBP2.94□□□□□ -1.94
OTU1YFL044C VPS55P47111 140 aa2.94□□□□□ -1.94
OTU1YFL044C YMR181CQ03231 154 aa2.94□□□□□ -1.94
OTU1YFL044C PRM3Q08931 133 aa2.94□□□□□ -1.94
OTU1YFL044C FCY1Q12178 158 aa2.94□□□□□ -1.94
OTU1YFL044C DGK1Q12382 290 aa2.94□□□□□ -1.94
OTU1YFL044C TDH1P00360 332 aaKnown RBP2.93□□□□□ -1.94
OTU1YFL044C COX2P00410 251 aa2.93□□□□□ -1.94
OTU1YFL044C REP2P03872 296 aa2.93□□□□□ -1.94
OTU1YFL044C RFA3P26755 122 aaKnown RBP2.93□□□□□ -1.94
OTU1YFL044C AUA1P32450 94 aa2.93□□□□□ -1.94
OTU1YFL044C YKL075CP36083 450 aa2.93□□□□□ -1.94
OTU1YFL044C MIX23P38162 196 aa2.93□□□□□ -1.94
OTU1YFL044C UMP1P38293 148 aa2.93□□□□□ -1.94
OTU1YFL044C YBR285WP38354 144 aa2.93□□□□□ -1.94
OTU1YFL044C JLP2P40206 208 aa2.93□□□□□ -1.94
OTU1YFL044C YJL213WP40896 331 aa2.93□□□□□ -1.94
OTU1YFL044C YGL262WP53054 175 aa2.93□□□□□ -1.94
OTU1YFL044C LST7P53237 242 aa2.93□□□□□ -1.94
OTU1YFL044C CAB4P53332 305 aa2.93□□□□□ -1.94
OTU1YFL044C CAF40P53829 373 aa2.93□□□□□ -1.94
OTU1YFL044C YMR252CQ04814 134 aa2.93□□□□□ -1.94
OTU1YFL044C ATG17Q06410 417 aa2.93□□□□□ -1.94
OTU1YFL044C HEM25Q07534 307 aa2.93□□□□□ -1.94
OTU1YFL044C AHC2P25649 128 aa2.92□□□□□ -1.94
OTU1YFL044C VMA5P31412 392 aaKnown RBP2.92□□□□□ -1.94
OTU1YFL044C ARO4P32449 370 aaKnown RBP2.92□□□□□ -1.94
OTU1YFL044C PAU2P32612 120 aa2.92□□□□□ -1.94
OTU1YFL044C YKL063CP35725 167 aa2.92□□□□□ -1.94
OTU1YFL044C SWD3P38123 315 aa2.92□□□□□ -1.94
OTU1YFL044C EGD2P38879 174 aaKnown RBP2.92□□□□□ -1.94
OTU1YFL044C SMB1P40018 196 aaKnown RBP2.92□□□□□ -1.94
OTU1YFL044C FMC1P40491 155 aa2.92□□□□□ -1.94
OTU1YFL044C YCH1P42937 148 aa2.92□□□□□ -1.94
OTU1YFL044C ORM1P53224 222 aa2.92□□□□□ -1.94
OTU1YFL044C RSM27P53305 110 aa2.92□□□□□ -1.94
OTU1YFL044C GRX5Q02784 150 aa2.92□□□□□ -1.94
OTU1YFL044C ATC1Q04005 294 aa2.92□□□□□ -1.94
OTU1YFL044C YHP1Q04116 353 aa2.92□□□□□ -1.94
OTU1YFL044C FIT1Q04433 528 aa2.92□□□□□ -1.94
OTU1YFL044C ERP1Q05359 219 aaKnown RBP2.92□□□□□ -1.94
OTU1YFL044C YLR283WQ05867 314 aa2.92□□□□□ -1.94
OTU1YFL044C MDM36Q06820 579 aa2.92□□□□□ -1.94
OTU1YFL044C YPD1Q07688 167 aa2.92□□□□□ -1.94
OTU1YFL044C YOL029CQ08187 201 aa2.92□□□□□ -1.94
OTU1YFL044C TRM10Q12400 293 aa2.92□□□□□ -1.94
OTU1YFL044C CPR1P14832 162 aaKnown RBP2.91□□□□□ -1.94
OTU1YFL044C FUS3P16892 353 aaKnown RBP2.91□□□□□ -1.94
OTU1YFL044C ERG24P32462 438 aaKnown RBP2.91□□□□□ -1.94
OTU1YFL044C ACP1P32463 125 aa2.91□□□□□ -1.94
OTU1YFL044C UTP30P36144 274 aaKnown RBP2.91□□□□□ -1.94
OTU1YFL044C ECM4P36156 370 aa2.91□□□□□ -1.94
OTU1YFL044C NVJ1P38881 321 aa2.91□□□□□ -1.94
OTU1YFL044C AVT6P40074 448 aa2.91□□□□□ -1.94
OTU1YFL044C KEG1P43614 200 aa2.91□□□□□ -1.94
OTU1YFL044C BNA6P43619 295 aa2.91□□□□□ -1.94
OTU1YFL044C VMA10P48836 114 aaKnown RBP2.91□□□□□ -1.94
OTU1YFL044C DIE2P50076 525 aa2.91□□□□□ -1.94
OTU1YFL044C ERG25P53045 309 aa2.91□□□□□ -1.94
OTU1YFL044C PLP1Q04004 230 aa2.91□□□□□ -1.94
OTU1YFL044C NMA1Q06178 401 aaKnown RBP2.91□□□□□ -1.94
OTU1YFL044C YGK3Q12222 375 aaPredicted RBP2.91□□□□□ -1.94
OTU1YFL044C TFC7Q12415 435 aa2.91□□□□□ -1.94
OTU1YFL044C GRX2P17695 143 aaKnown RBP2.9□□□□□ -1.95
OTU1YFL044C IFM1P25038 676 aa2.9□□□□□ -1.95
OTU1YFL044C OCH1P31755 480 aa2.9□□□□□ -1.95
OTU1YFL044C SRY1P36007 326 aa2.9□□□□□ -1.95
OTU1YFL044C BFR1P38934 470 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
OTU1YFL044C BMT5P40493 336 aa2.9□□□□□ -1.95
OTU1YFL044C SYS1P41544 203 aa2.9□□□□□ -1.95
OTU1YFL044C SOL1P50278 321 aa2.9□□□□□ -1.95
OTU1YFL044C RPL9BP51401 191 aaKnown RBP2.9□□□□□ -1.95
OTU1YFL044C TDA1Q03533 586 aa2.9□□□□□ -1.95
OTU1YFL044C HNT1Q04344 158 aaKnown RBP2.9□□□□□ -1.95
OTU1YFL044C SCW10Q04951 389 aa2.9□□□□□ -1.95
OTU1YFL044C ASR1Q06834 288 aa2.9□□□□□ -1.95
OTU1YFL044C PBP4Q07362 185 aaKnown RBP2.9□□□□□ -1.95
OTU1YFL044C JID1Q12350 301 aa2.9□□□□□ -1.95
OTU1YFL044C YOR192C-CQ3E736 78 aa2.9□□□□□ -1.95
OTU1YFL044C YCR024C-BQ3E7Z8 88 aa2.9□□□□□ -1.95
OTU1YFL044C CYC3P06182 269 aa2.89□□□□□ -1.95
OTU1YFL044C PET54P10834 293 aa2.89□□□□□ -1.95
OTU1YFL044C STF2P16965 84 aa2.89□□□□□ -1.95
OTU1YFL044C BUD23P25627 275 aaPredicted RBP2.89□□□□□ -1.95
OTU1YFL044C YRA2P36036 203 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
OTU1YFL044C IKI1P38874 309 aa2.89□□□□□ -1.95
OTU1YFL044C COX14P39103 70 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms