RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C TTI2P47168 421 aa5.52□□□□□ -1.53
YPT1YFL038C GEP7P53171 287 aa5.52□□□□□ -1.53
YPT1YFL038C YGR050CP53231 118 aa5.52□□□□□ -1.53
YPT1YFL038C YPL108WQ02872 168 aaPredicted RBP5.52□□□□□ -1.53
YPT1YFL038C YFH1Q07540 174 aa5.52□□□□□ -1.53
YPT1YFL038C ERV2Q12284 196 aa5.52□□□□□ -1.53
YPT1YFL038C BOL1Q3E793 110 aa5.52□□□□□ -1.53
YPT1YFL038C PAU19P0CE85 124 aa5.51□□□□□ -1.53
YPT1YFL038C PAU21P0CE86 164 aa5.51□□□□□ -1.53
YPT1YFL038C PAU22P0CE87 164 aa5.51□□□□□ -1.53
YPT1YFL038C SEC62P21825 274 aa5.51□□□□□ -1.53
YPT1YFL038C LDB16P25587 256 aa5.51□□□□□ -1.53
YPT1YFL038C PAU3P25610 124 aa5.51□□□□□ -1.53
YPT1YFL038C YOX1P34161 385 aa5.51□□□□□ -1.53
YPT1YFL038C ATP3P38077 311 aaKnown RBP5.51□□□□□ -1.53
YPT1YFL038C HSP10P38910 106 aa5.51□□□□□ -1.53
YPT1YFL038C SUR2P38992 349 aa5.51□□□□□ -1.53
YPT1YFL038C PSD1P39006 500 aa5.51□□□□□ -1.53
YPT1YFL038C PCL7P40186 285 aa5.51□□□□□ -1.53
YPT1YFL038C TAX4P47030 604 aa5.51□□□□□ -1.53
YPT1YFL038C ARP3P47117 449 aaKnown RBP5.51□□□□□ -1.53
YPT1YFL038C SIP18P50263 79 aa5.51□□□□□ -1.53
YPT1YFL038C YGL114WP53134 725 aa5.51□□□□□ -1.53
YPT1YFL038C HCH1P53834 153 aa5.51□□□□□ -1.53
YPT1YFL038C FYV6P53913 173 aa5.51□□□□□ -1.53
YPT1YFL038C DMA2P53924 522 aa5.51□□□□□ -1.53
YPT1YFL038C HSK3P69852 69 aa5.51□□□□□ -1.53
YPT1YFL038C YPL067CQ02754 198 aa5.51□□□□□ -1.53
YPT1YFL038C CRR1Q05790 422 aa5.51□□□□□ -1.53
YPT1YFL038C VPS63O13549 108 aa5.5□□□□□ -1.53
YPT1YFL038C NHP6AP11632 93 aaKnown RBP5.5□□□□□ -1.53
YPT1YFL038C YMR31P19955 123 aa5.5□□□□□ -1.53
YPT1YFL038C ROX3P25046 220 aa5.5□□□□□ -1.53
YPT1YFL038C ALK2P32789 676 aaPredicted RBP5.5□□□□□ -1.53
YPT1YFL038C YNK1P36010 153 aaKnown RBP5.5□□□□□ -1.53
YPT1YFL038C YMR262WP38430 313 aa5.5□□□□□ -1.53
YPT1YFL038C YHR138CP38841 114 aaPredicted RBP5.5□□□□□ -1.53
YPT1YFL038C SEC24P40482 926 aaKnown RBP5.5□□□□□ -1.53
YPT1YFL038C RTS2P40962 232 aa5.5□□□□□ -1.53
YPT1YFL038C YAP1802P53309 568 aa5.5□□□□□ -1.53
YPT1YFL038C ARL3Q02804 198 aa5.5□□□□□ -1.53
YPT1YFL038C LIP2Q06005 328 aa5.5□□□□□ -1.53
YPT1YFL038C PML1Q07930 204 aaPredicted RBP5.5□□□□□ -1.53
YPT1YFL038C YPS3Q12303 508 aa5.5□□□□□ -1.53
YPT1YFL038C YOP1Q12402 180 aa5.5□□□□□ -1.53
YPT1YFL038C RAX2Q12465 1220 aa5.5□□□□□ -1.53
YPT1YFL038C PET494P07390 489 aaPredicted RBP5.49□□□□□ -1.53
YPT1YFL038C RIP1P08067 215 aa5.49□□□□□ -1.53
YPT1YFL038C RPL35AP0CX84 120 aaKnown RBP5.49□□□□□ -1.53
YPT1YFL038C RPL35BP0CX85 120 aaKnown RBP5.49□□□□□ -1.53
YPT1YFL038C FRS1P15624 595 aaKnown RBP5.49□□□□□ -1.53
YPT1YFL038C FCY2P17064 533 aa5.49□□□□□ -1.53
YPT1YFL038C GAR1P28007 205 aaKnown RBP5.49□□□□□ -1.53
YPT1YFL038C REC104P33323 182 aa5.49□□□□□ -1.53
YPT1YFL038C YBL059WP34224 193 aa5.49□□□□□ -1.53
YPT1YFL038C CPR5P35176 225 aa5.49□□□□□ -1.53
YPT1YFL038C SSS1P35179 80 aa5.49□□□□□ -1.53
YPT1YFL038C RTC3P38804 111 aaPredicted RBP5.49□□□□□ -1.53
YPT1YFL038C GET2P40056 285 aa5.49□□□□□ -1.53
YPT1YFL038C PAU5P43575 122 aa5.49□□□□□ -1.53
YPT1YFL038C ATG27P46989 271 aa5.49□□□□□ -1.53
YPT1YFL038C XPT1P47165 209 aa5.49□□□□□ -1.53
YPT1YFL038C YPL077CQ02831 240 aa5.49□□□□□ -1.53
YPT1YFL038C MED7Q08278 222 aa5.49□□□□□ -1.53
YPT1YFL038C RPS25BP0C0T4 108 aaKnown RBP5.48□□□□□ -1.53
YPT1YFL038C COQ3P27680 312 aa5.48□□□□□ -1.53
YPT1YFL038C AFR1P33304 620 aa5.48□□□□□ -1.53
YPT1YFL038C MRPL28P36527 147 aa5.48□□□□□ -1.53
YPT1YFL038C LOC1P43586 204 aaPredicted RBP5.48□□□□□ -1.53
YPT1YFL038C GON7P46984 123 aa5.48□□□□□ -1.53
YPT1YFL038C YGL185CP53100 379 aa5.48□□□□□ -1.53
YPT1YFL038C WSC2P53832 503 aa5.48□□□□□ -1.53
YPT1YFL038C DAL4Q04895 635 aa5.48□□□□□ -1.53
YPT1YFL038C RPS25AQ3E792 108 aaPredicted RBP5.48□□□□□ -1.53
YPT1YFL038C HEM4P06174 275 aa5.47□□□□□ -1.53
YPT1YFL038C URA5P13298 226 aaKnown RBP5.47□□□□□ -1.53
YPT1YFL038C MOH1P38191 138 aa5.47□□□□□ -1.53
YPT1YFL038C RPS26AP39938 119 aaKnown RBP5.47□□□□□ -1.53
YPT1YFL038C RPS26BP39939 119 aaKnown RBP5.47□□□□□ -1.53
YPT1YFL038C YEL057CP39983 233 aa5.47□□□□□ -1.53
YPT1YFL038C CUE4Q04201 117 aaPredicted RBP5.47□□□□□ -1.53
YPT1YFL038C PIN2Q12057 282 aa5.47□□□□□ -1.53
YPT1YFL038C USV1Q12132 391 aa5.47□□□□□ -1.53
YPT1YFL038C YGL258W-AQ3E740 77 aa5.47□□□□□ -1.53
YPT1YFL038C IRA2P19158 3079 aa5.46□□□□□ -1.54
YPT1YFL038C RPS22AP0C0W1 130 aaKnown RBP5.46□□□□□ -1.54
YPT1YFL038C SPS18P32572 300 aa5.46□□□□□ -1.54
YPT1YFL038C QDR3P38227 689 aa5.46□□□□□ -1.54
YPT1YFL038C CUE1P38428 203 aa5.46□□□□□ -1.54
YPT1YFL038C RPN14P53196 417 aa5.46□□□□□ -1.54
YPT1YFL038C LST7P53237 242 aa5.46□□□□□ -1.54
YPT1YFL038C BOR1P53838 576 aa5.46□□□□□ -1.54
YPT1YFL038C CYT2Q00873 224 aa5.46□□□□□ -1.54
YPT1YFL038C ARR3Q06598 404 aa5.46□□□□□ -1.54
YPT1YFL038C IRC22P40006 225 aa5.45□□□□□ -1.54
YPT1YFL038C NOP16P40007 231 aaKnown RBP5.45□□□□□ -1.54
YPT1YFL038C LSM4P40070 187 aaKnown RBP5.45□□□□□ -1.54
YPT1YFL038C UBC13P52490 153 aa5.45□□□□□ -1.54
YPT1YFL038C ERV14P53173 138 aa5.45□□□□□ -1.54
YPT1YFL038C CRH1P53301 507 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms