RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	TY1A-ER1	P0CX71	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-LR2	P0CX72	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-PL	P0CX73	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-JR1	P0CX74	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-LR3	P0CX75	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-ML2	P0CX76	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	SRB6	P32570	121 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	ALG14	P38242	237 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	GTT1	P40582	234 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TAD2	P47058	250 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	YJR111C	P47148	283 aa	Known RBP	5.31	□□□□□ -1.56
VMA3	YEL027W	RPL9B	P51401	191 aa	Known RBP	5.31	□□□□□ -1.56
VMA3	YEL027W	YGR045C	P53229	120 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	YIF1	P53845	314 aa	Known RBP	5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-GR1	Q12085	440 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	YPR071W	Q12346	211 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.31	□□□□□ -1.56
VMA3	YEL027W	TY1A-OL	Q92392	440 aa	Known RBP	5.31	□□□□□ -1.56
VMA3	YEL027W	HBN1	Q96VH4	193 aa		5.31	□□□□□ -1.56
VMA3	YEL027W	TDH1	P00360	332 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	BGL2	P15703	313 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	EMP24	P32803	203 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	YKL162C	P36052	402 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	PMU1	P36069	295 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	NOP16	P40007	231 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	LSM8	P47093	109 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	BNA1	P47096	177 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	PKP2	P53170	491 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	MSO1	P53604	210 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	APJ1	P53940	528 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	ERV25	P54837	211 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	ODC1	Q03028	310 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	MIX17	Q03667	156 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	ERP1	Q05359	219 aa	Known RBP	5.3	□□□□□ -1.56
VMA3	YEL027W	ATG5	Q12380	294 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	YBR255C-A	Q3E776	120 aa		5.3	□□□□□ -1.56
VMA3	YEL027W	HEM13	P11353	328 aa	Known RBP	5.29	□□□□□ -1.56
VMA3	YEL027W	ERV1	P27882	189 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	CDS1	P38221	457 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	IMD2	P38697	523 aa	Known RBP	5.29	□□□□□ -1.56
VMA3	YEL027W	YEA6	P39953	335 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	YIL024C	P40543	189 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	AGX1	P43567	385 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	ARP3	P47117	449 aa	Known RBP	5.29	□□□□□ -1.56
VMA3	YEL027W	PUS4	P48567	403 aa	Known RBP	5.29	□□□□□ -1.56
VMA3	YEL027W	STD1	Q02794	444 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	YMR090W	Q04304	227 aa	Known RBP	5.29	□□□□□ -1.56
VMA3	YEL027W	FSH2	Q05015	223 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	AIM45	Q12480	344 aa	Known RBP	5.29	□□□□□ -1.56
VMA3	YEL027W	PCC1	Q3E833	88 aa		5.29	□□□□□ -1.56
VMA3	YEL027W	SLM6	P38343	150 aa		5.28	□□□□□ -1.56
VMA3	YEL027W	TIF11	P38912	153 aa	Known RBP	5.28	□□□□□ -1.56
VMA3	YEL027W	ASP1	P38986	381 aa	Predicted RBP	5.28	□□□□□ -1.56
VMA3	YEL027W	PIC2	P40035	300 aa		5.28	□□□□□ -1.56
VMA3	YEL027W	YJR056C	P47115	236 aa		5.28	□□□□□ -1.56
VMA3	YEL027W	SRB7	P47822	140 aa		5.28	□□□□□ -1.56
VMA3	YEL027W	SNN1	P48232	102 aa		5.28	□□□□□ -1.56
VMA3	YEL027W	YIP1	P53039	248 aa		5.28	□□□□□ -1.56
VMA3	YEL027W	BER1	Q06688	274 aa	Known RBP	5.28	□□□□□ -1.56
VMA3	YEL027W	FCF2	Q12035	217 aa	Predicted RBP	5.28	□□□□□ -1.56
VMA3	YEL027W	ADE8	P04161	214 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	MRS4	P23500	304 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	LDS1	P31379	325 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	RPD3	P32561	433 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	YKL102C	P34249	101 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	GCV3	P39726	170 aa	Predicted RBP	5.27	□□□□□ -1.57
VMA3	YEL027W	YIL077C	P40508	320 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	MCM22	P47167	239 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	BUL1	P48524	976 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	YGL117W	P53133	265 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	HOF1	Q05080	669 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	YPL264C	Q08980	353 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	YGL258W-A	Q3E740	77 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	VMA9	Q3E7B6	73 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	COA2	Q3E823	68 aa		5.27	□□□□□ -1.57
VMA3	YEL027W	PHO85	P17157	305 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	DAL3	P32459	195 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	ECM25	P32525	599 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	RTC3	P38804	111 aa	Predicted RBP	5.26	□□□□□ -1.57
VMA3	YEL027W	YEA4	P40004	342 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	RFC2	P40348	353 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	PGD1	P40356	397 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	YGR050C	P53231	118 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	ARL3	Q02804	198 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	YPL108W	Q02872	168 aa	Predicted RBP	5.26	□□□□□ -1.57
VMA3	YEL027W	EST3	Q03096	181 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	YMR082C	Q04276	118 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	ATO3	Q12359	275 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	RAX2	Q12465	1220 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	Q0142	Q9ZZW4	58 aa		5.26	□□□□□ -1.57
VMA3	YEL027W	HTB1	P02293	131 aa	Known RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	TRP4	P07285	380 aa	Predicted RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	UBI4	P0CG63	381 aa	Known RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	URA5	P13298	226 aa	Known RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	FRS1	P15624	595 aa	Known RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	NOP1	P15646	327 aa	Known RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	SUA7	P29055	345 aa	Predicted RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	RAD23	P32628	398 aa	Known RBP	5.25	□□□□□ -1.57
VMA3	YEL027W	PRE3	P38624	215 aa		5.25	□□□□□ -1.57
VMA3	YEL027W	NSE4	P43124	402 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms