RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C CIN5P40917 295 aa-2.27□□□□□ -2.77
SPG3YDR504C REX3Q12090 404 aa-2.27□□□□□ -2.77
SPG3YDR504C IKI3Q06706 1349 aaKnown RBP-2.27□□□□□ -2.77
SPG3YDR504C YAR023CD6VPM8 179 aa-2.28□□□□□ -2.77
SPG3YDR504C TCP1P12612 559 aaKnown RBP-2.28□□□□□ -2.77
SPG3YDR504C YPK2P18961 677 aa-2.28□□□□□ -2.77
SPG3YDR504C APS1P35181 156 aa-2.28□□□□□ -2.77
SPG3YDR504C FAR7P43592 221 aa-2.28□□□□□ -2.77
SPG3YDR504C TRM9P49957 279 aa-2.28□□□□□ -2.77
SPG3YDR504C NAT3Q06504 195 aa-2.28□□□□□ -2.77
SPG3YDR504C MED4Q12343 284 aa-2.28□□□□□ -2.77
SPG3YDR504C RPL24AP04449 155 aaKnown RBP-2.29□□□□□ -2.78
SPG3YDR504C PTM1P32857 523 aa-2.29□□□□□ -2.78
SPG3YDR504C POG1P40473 351 aa-2.29□□□□□ -2.78
SPG3YDR504C ARP3P47117 449 aaKnown RBP-2.29□□□□□ -2.78
SPG3YDR504C BXI1P48558 297 aa-2.29□□□□□ -2.78
SPG3YDR504C NSA1P53136 463 aaPredicted RBP-2.29□□□□□ -2.78
SPG3YDR504C YNL122CP53921 115 aaPredicted RBP-2.29□□□□□ -2.78
SPG3YDR504C BCY1P07278 416 aaKnown RBP-2.3□□□□□ -2.78
SPG3YDR504C PRE1P22141 198 aaKnown RBP-2.3□□□□□ -2.78
SPG3YDR504C RIB7P33312 244 aa-2.3□□□□□ -2.78
SPG3YDR504C PAM17P36147 197 aa-2.3□□□□□ -2.78
SPG3YDR504C YGR050CP53231 118 aa-2.3□□□□□ -2.78
SPG3YDR504C YNL033WP53964 284 aa-2.3□□□□□ -2.78
SPG3YDR504C SPT3P06844 337 aa-2.31□□□□□ -2.78
SPG3YDR504C OM45P16547 393 aa-2.31□□□□□ -2.78
SPG3YDR504C DBP3P20447 523 aaKnown RBP-2.31□□□□□ -2.78
SPG3YDR504C CKS1P20486 150 aaKnown RBP-2.31□□□□□ -2.78
SPG3YDR504C HOC1P47124 396 aa-2.31□□□□□ -2.78
SPG3YDR504C YIL002W-AQ3E7Z5 69 aa-2.31□□□□□ -2.78
SPG3YDR504C SHH3Q04487 196 aa-2.32□□□□□ -2.78
SPG3YDR504C GGA1Q06336 557 aa-2.32□□□□□ -2.78
SPG3YDR504C RRT8Q08219 342 aa-2.32□□□□□ -2.78
SPG3YDR504C YMR030W-AQ3E760 96 aa-2.33□□□□□ -2.78
SPG3YDR504C OPI1P21957 404 aa-2.34□□□□□ -2.78
SPG3YDR504C OCH1P31755 480 aa-2.34□□□□□ -2.78
SPG3YDR504C NTF2P33331 125 aaKnown RBP-2.34□□□□□ -2.78
SPG3YDR504C CUP9P41817 306 aa-2.34□□□□□ -2.78
SPG3YDR504C MRPL50P53724 139 aa-2.34□□□□□ -2.78
SPG3YDR504C CDC28P00546 298 aaKnown RBP-2.35□□□□□ -2.79
SPG3YDR504C HAP2P06774 265 aa-2.35□□□□□ -2.79
SPG3YDR504C PET100P38958 111 aa-2.35□□□□□ -2.79
SPG3YDR504C RMD6P39975 231 aa-2.35□□□□□ -2.79
SPG3YDR504C HNT1Q04344 158 aaKnown RBP-2.35□□□□□ -2.79
SPG3YDR504C URA6P15700 204 aa-2.36□□□□□ -2.79
SPG3YDR504C CCC1P47818 322 aa-2.36□□□□□ -2.79
SPG3YDR504C YNL134CP53912 376 aaKnown RBP-2.36□□□□□ -2.79
SPG3YDR504C YMR321CQ04898 105 aa-2.36□□□□□ -2.79
SPG3YDR504C RFC2P40348 353 aa-2.37□□□□□ -2.79
SPG3YDR504C EGD1Q02642 157 aaKnown RBP-2.37□□□□□ -2.79
SPG3YDR504C HRD1Q08109 551 aa-2.37□□□□□ -2.79
SPG3YDR504C YNG1Q08465 219 aa-2.37□□□□□ -2.79
SPG3YDR504C ADF1Q2V2Q1 113 aa-2.37□□□□□ -2.79
SPG3YDR504C TPM1P17536 199 aaKnown RBP-2.38□□□□□ -2.79
SPG3YDR504C CUE1P38428 203 aa-2.38□□□□□ -2.79
SPG3YDR504C YMR099CQ03161 297 aaKnown RBP-2.38□□□□□ -2.79
SPG3YDR504C DGK1Q12382 290 aa-2.38□□□□□ -2.79
SPG3YDR504C STE18P18852 110 aa-2.39□□□□□ -2.79
SPG3YDR504C PDS1P40316 373 aaPredicted RBP-2.39□□□□□ -2.79
SPG3YDR504C YHP1Q04116 353 aa-2.39□□□□□ -2.79
SPG3YDR504C DYN3Q04949 312 aa-2.39□□□□□ -2.79
SPG3YDR504C YOR015WQ12169 119 aa-2.39□□□□□ -2.79
SPG3YDR504C UTP20P35194 2493 aaKnown RBP-2.39□□□□□ -2.79
SPG3YDR504C YCR090CP25654 182 aaKnown RBP-2.4□□□□□ -2.79
SPG3YDR504C CCS1P40202 249 aaKnown RBP-2.4□□□□□ -2.79
SPG3YDR504C GLR1P41921 483 aaKnown RBP-2.4□□□□□ -2.79
SPG3YDR504C COG5P53951 403 aa-2.4□□□□□ -2.79
SPG3YDR504C FMN1Q03778 218 aa-2.4□□□□□ -2.79
SPG3YDR504C YHR214C-EQ8TGK0 99 aa-2.4□□□□□ -2.79
SPG3YDR504C SEC4P07560 215 aaKnown RBP-2.41□□□□□ -2.8
SPG3YDR504C SNF4P12904 322 aa-2.41□□□□□ -2.8
SPG3YDR504C MAK31P23059 88 aa-2.41□□□□□ -2.8
SPG3YDR504C OTU1P43558 301 aa-2.41□□□□□ -2.8
SPG3YDR504C GPI14P47088 403 aaKnown RBP-2.41□□□□□ -2.8
SPG3YDR504C LIA1P47120 325 aaKnown RBP-2.41□□□□□ -2.8
SPG3YDR504C EMC2P47133 292 aaKnown RBP-2.41□□□□□ -2.8
SPG3YDR504C TIR1P10863 254 aa-2.42□□□□□ -2.8
SPG3YDR504C ALG13P53178 202 aa-2.42□□□□□ -2.8
SPG3YDR504C AVO2Q04749 426 aa-2.42□□□□□ -2.8
SPG3YDR504C YMR253CQ04835 414 aa-2.42□□□□□ -2.8
SPG3YDR504C STF1P01098 86 aa-2.43□□□□□ -2.8
SPG3YDR504C MATALPHA2P0CY08 210 aa-2.43□□□□□ -2.8
SPG3YDR504C HMLALPHA2P0CY09 210 aa-2.43□□□□□ -2.8
SPG3YDR504C MAG1P22134 296 aaKnown RBP-2.43□□□□□ -2.8
SPG3YDR504C RTT105P40063 208 aa-2.43□□□□□ -2.8
SPG3YDR504C NSE4P43124 402 aa-2.43□□□□□ -2.8
SPG3YDR504C IDP1P21954 428 aaKnown RBP-2.44□□□□□ -2.8
SPG3YDR504C CAF4P36130 643 aa-2.44□□□□□ -2.8
SPG3YDR504C YER134CP40081 178 aa-2.44□□□□□ -2.8
SPG3YDR504C ERG10P41338 398 aaKnown RBP-2.44□□□□□ -2.8
SPG3YDR504C FYV6P53913 173 aa-2.44□□□□□ -2.8
SPG3YDR504C HHT1P61830 136 aa-2.44□□□□□ -2.8
SPG3YDR504C PIR1Q03178 341 aa-2.44□□□□□ -2.8
SPG3YDR504C CDC39P25655 2108 aaKnown RBP-2.45□□□□□ -2.8
SPG3YDR504C MGT1P26188 188 aa-2.45□□□□□ -2.8
SPG3YDR504C BRR6P53062 197 aa-2.45□□□□□ -2.8
SPG3YDR504C KRE28Q04431 385 aa-2.45□□□□□ -2.8
SPG3YDR504C YOL107WQ12239 342 aa-2.45□□□□□ -2.8
SPG3YDR504C YOL164W-AQ3E7A5 60 aa-2.45□□□□□ -2.8
SPG3YDR504C IGO2Q9P305 131 aa-2.45□□□□□ -2.8
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms