RNA–Protein interactions for RNA: YDL046W

NPC2, Transcript of Functional homolog of human NPC2/He1, yeast

Gene NPC2, Length 522 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPC2	YDL046W	YJL225C	P40889	1758 aa		0.51	□□□□□ -2.33
NPC2	YDL046W	ARP3	P47117	449 aa	Known RBP	0.51	□□□□□ -2.33
NPC2	YDL046W	DAD4	P69851	72 aa		0.51	□□□□□ -2.33
NPC2	YDL046W	YMR099C	Q03161	297 aa	Known RBP	0.51	□□□□□ -2.33
NPC2	YDL046W	DYN3	Q04949	312 aa		0.51	□□□□□ -2.33
NPC2	YDL046W	IRC23	Q08416	157 aa		0.51	□□□□□ -2.33
NPC2	YDL046W	COX8	P04039	78 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	CBF1	P17106	351 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	RPB4	P20433	221 aa	Predicted RBP	0.5	□□□□□ -2.33
NPC2	YDL046W	NTG1	P31378	399 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	ECM4	P36156	370 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	HPA3	P39979	161 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	YER134C	P40081	178 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	HUA1	P40325	198 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	MMS2	P53152	137 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	NOP19	P53317	196 aa	Predicted RBP	0.5	□□□□□ -2.33
NPC2	YDL046W	YMR007W	Q03675	126 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	YMR226C	Q05016	267 aa	Known RBP	0.5	□□□□□ -2.33
NPC2	YDL046W	FUS2	Q05670	677 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	NAT3	Q06504	195 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	PRP11	Q07350	266 aa	Predicted RBP	0.5	□□□□□ -2.33
NPC2	YDL046W	YOL014W	Q08110	124 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	FIT2	Q08906	153 aa		0.5	□□□□□ -2.33
NPC2	YDL046W	JIP3	O13555	125 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	QCR7	P00128	127 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	MATALPHA2	P0CY08	210 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	HMLALPHA2	P0CY09	210 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	YPK2	P18961	677 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	YCL042W	P25572	119 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	MGT1	P26188	188 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	RPB7	P34087	171 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	YKT6	P36015	200 aa	Known RBP	0.49	□□□□□ -2.33
NPC2	YDL046W	FMP23	P38231	175 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	AIM2	P39721	246 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	RFC4	P40339	323 aa	Known RBP	0.49	□□□□□ -2.33
NPC2	YDL046W	YJR111C	P47148	283 aa	Known RBP	0.49	□□□□□ -2.33
NPC2	YDL046W	UBC12	P52491	188 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	THG1	P53215	237 aa	Known RBP	0.49	□□□□□ -2.33
NPC2	YDL046W	MRPS17	Q03246	237 aa	Predicted RBP	0.49	□□□□□ -2.33
NPC2	YDL046W	YMR295C	Q03559	197 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	ARO80	Q04052	950 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	ABP140	Q08641	628 aa	Known RBP	0.49	□□□□□ -2.33
NPC2	YDL046W	YPR013C	Q12145	317 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	YML100W-A	Q8TGT0	57 aa		0.49	□□□□□ -2.33
NPC2	YDL046W	YER188C-A	P0C0V2	99 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	TIR1	P10863	254 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	PAM17	P36147	197 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	MTW1	P39731	289 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	TDA4	P47153	279 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	RPL37B	P51402	88 aa	Known RBP	0.48	□□□□□ -2.33
NPC2	YDL046W	YNL184C	P53876	108 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	YNL033W	P53964	284 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	YLR460C	P54007	376 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	SHH3	Q04487	196 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	YMR315W	Q04869	349 aa	Known RBP	0.48	□□□□□ -2.33
NPC2	YDL046W	YLR031W	Q07978	186 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	COA3	Q3E7B2	85 aa		0.48	□□□□□ -2.33
NPC2	YDL046W	ARO7	P32178	256 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	SFK1	P35735	353 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	PDS1	P40316	373 aa	Predicted RBP	0.47	□□□□□ -2.33
NPC2	YDL046W	CUP9	P41817	306 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	YFL019C	P43576	117 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	ALB1	P47019	175 aa	Predicted RBP	0.47	□□□□□ -2.33
NPC2	YDL046W	UPS3	Q04006	179 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	YMR253C	Q04835	414 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	YLR036C	Q07986	203 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	GET4	Q12125	312 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	ADF1	Q2V2Q1	113 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	IGO2	Q9P305	131 aa		0.47	□□□□□ -2.33
NPC2	YDL046W	SNF4	P12904	322 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	SEN2	P16658	377 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	IDP1	P21954	428 aa	Known RBP	0.46	□□□□□ -2.34
NPC2	YDL046W	GSP2	P32836	220 aa	Known RBP	0.46	□□□□□ -2.34
NPC2	YDL046W	SPC25	P40014	221 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	GPI14	P47088	403 aa	Known RBP	0.46	□□□□□ -2.34
NPC2	YDL046W	VPS71	Q03433	280 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	YDR391C	Q04170	232 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	LCL2	Q08045	131 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	YOL024W	Q08172	172 aa		0.46	□□□□□ -2.34
NPC2	YDL046W	PST2	Q12335	198 aa	Known RBP	0.46	□□□□□ -2.34
NPC2	YDL046W	SLH1	P53327	1967 aa	Known RBP	0.45	□□□□□ -2.34
NPC2	YDL046W	YCR023C	P25351	611 aa		0.45	□□□□□ -2.34
NPC2	YDL046W	MRPL15	P36523	253 aa		0.45	□□□□□ -2.34
NPC2	YDL046W	TMA22	P47089	198 aa	Predicted RBP	0.45	□□□□□ -2.34
NPC2	YDL046W	DIG2	Q03373	323 aa	Known RBP	0.45	□□□□□ -2.34
NPC2	YDL046W	CWC21	Q03375	135 aa	Known RBP	0.45	□□□□□ -2.34
NPC2	YDL046W	AIM36	Q03798	255 aa		0.45	□□□□□ -2.34
NPC2	YDL046W	YPR203W	Q08994	102 aa		0.45	□□□□□ -2.34
NPC2	YDL046W	RAD9	P14737	1309 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	ACC1	Q00955	2233 aa	Known RBP	0.44	□□□□□ -2.34
NPC2	YDL046W	TAH1	P25638	111 aa	Predicted RBP	0.44	□□□□□ -2.34
NPC2	YDL046W	ADE1	P27616	306 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	YBR242W	P38331	238 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	MPM1	P40364	252 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	YGL235W	P53071	178 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	CGR1	P53188	120 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	RTC4	P53850	401 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	PGA1	P53896	198 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	MET31	Q03081	177 aa		0.44	□□□□□ -2.34
NPC2	YDL046W	NOC4	Q06512	552 aa	Predicted RBP	0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms