RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 ATX2Q12067 313 aa7.42□□□□□ -1.22
LSR1LSR1 YPT1P01123 206 aaKnown RBP7.41□□□□□ -1.22
LSR1LSR1 IMP1P28627 190 aa7.41□□□□□ -1.22
LSR1LSR1 MCH2P36032 473 aa7.41□□□□□ -1.22
LSR1LSR1 MTC6P38849 526 aa7.41□□□□□ -1.22
LSR1LSR1 YIL029CP40538 142 aa7.41□□□□□ -1.22
LSR1LSR1 RTS2P40962 232 aa7.41□□□□□ -1.22
LSR1LSR1 ATC1Q04005 294 aa7.41□□□□□ -1.22
LSR1LSR1 ALG6Q12001 544 aaKnown RBP7.41□□□□□ -1.22
LSR1LSR1 CSF1Q12150 2958 aa7.41□□□□□ -1.22
LSR1LSR1 RAX2Q12465 1220 aa7.41□□□□□ -1.22
LSR1LSR1 RPP2BP02400 110 aaKnown RBP7.4□□□□□ -1.22
LSR1LSR1 ATP5P09457 212 aa7.4□□□□□ -1.22
LSR1LSR1 MSI1P13712 422 aa7.4□□□□□ -1.22
LSR1LSR1 SPO13P23624 291 aa7.4□□□□□ -1.22
LSR1LSR1 MRPS5P33759 307 aa7.4□□□□□ -1.22
LSR1LSR1 RIB4P50861 169 aaPredicted RBP7.4□□□□□ -1.22
LSR1LSR1 MRPL19P53875 158 aa7.4□□□□□ -1.22
LSR1LSR1 YAP6Q03935 383 aa7.4□□□□□ -1.22
LSR1LSR1 MHR1Q06630 226 aa7.4□□□□□ -1.22
LSR1LSR1 PRP11Q07350 266 aaPredicted RBP7.4□□□□□ -1.22
LSR1LSR1 ERV2Q12284 196 aa7.4□□□□□ -1.22
LSR1LSR1 YDL085C-AQ3E7B7 68 aaKnown RBP7.4□□□□□ -1.22
LSR1LSR1 YNR034W-AQ3E841 98 aa7.4□□□□□ -1.22
LSR1LSR1 DAL82P21705 255 aa7.39□□□□□ -1.23
LSR1LSR1 SEC62P21825 274 aa7.39□□□□□ -1.23
LSR1LSR1 QCR9P22289 66 aa7.39□□□□□ -1.23
LSR1LSR1 ATG15P25641 520 aa7.39□□□□□ -1.23
LSR1LSR1 SHB17P36136 271 aaKnown RBP7.39□□□□□ -1.23
LSR1LSR1 MRPL11P36521 249 aaPredicted RBP7.39□□□□□ -1.23
LSR1LSR1 NTC20P38302 140 aaPredicted RBP7.39□□□□□ -1.23
LSR1LSR1 NSA2P40078 261 aaKnown RBP7.39□□□□□ -1.23
LSR1LSR1 YGR269WP40326 108 aa7.39□□□□□ -1.23
LSR1LSR1 PDR17P53844 350 aa7.39□□□□□ -1.23
LSR1LSR1 ATG4P53867 494 aa7.39□□□□□ -1.23
LSR1LSR1 YDR209CQ03480 137 aa7.39□□□□□ -1.23
LSR1LSR1 YMR254CQ04838 102 aa7.39□□□□□ -1.23
LSR1LSR1 PIN3Q06449 215 aa7.39□□□□□ -1.23
LSR1LSR1 YOR352WQ08816 343 aa7.39□□□□□ -1.23
LSR1LSR1 SWT1Q12104 458 aa7.39□□□□□ -1.23
LSR1LSR1 USV1Q12132 391 aa7.39□□□□□ -1.23
LSR1LSR1 YDL180WQ12301 547 aa7.39□□□□□ -1.23
LSR1LSR1 DAL3P32459 195 aa7.38□□□□□ -1.23
LSR1LSR1 COX15P40086 486 aa7.38□□□□□ -1.23
LSR1LSR1 ATG27P46989 271 aa7.38□□□□□ -1.23
LSR1LSR1 NUP53Q03790 475 aa7.38□□□□□ -1.23
LSR1LSR1 DPB4Q04603 196 aaKnown RBP7.38□□□□□ -1.23
LSR1LSR1 SEN15Q04675 128 aa7.38□□□□□ -1.23
LSR1LSR1 ERG27Q12452 347 aaKnown RBP7.38□□□□□ -1.23
LSR1LSR1 YIL134C-AQ45U18 67 aa7.38□□□□□ -1.23
LSR1LSR1 ATG40Q99325 256 aa7.38□□□□□ -1.23
LSR1LSR1 TRP4P07285 380 aaPredicted RBP7.37□□□□□ -1.23
LSR1LSR1 RIP1P08067 215 aa7.37□□□□□ -1.23
LSR1LSR1 AFR1P33304 620 aa7.37□□□□□ -1.23
LSR1LSR1 YKL107WP34251 309 aa7.37□□□□□ -1.23
LSR1LSR1 MRPL39P36533 70 aa7.37□□□□□ -1.23
LSR1LSR1 YEL057CP39983 233 aa7.37□□□□□ -1.23
LSR1LSR1 OST3P48439 350 aa7.37□□□□□ -1.23
LSR1LSR1 GEP7P53171 287 aa7.37□□□□□ -1.23
LSR1LSR1 YNR040WP53736 256 aa7.37□□□□□ -1.23
LSR1LSR1 SAE3P89114 91 aa7.37□□□□□ -1.23
LSR1LSR1 RIM9Q04734 239 aa7.37□□□□□ -1.23
LSR1LSR1 YPR098CQ06089 161 aa7.37□□□□□ -1.23
LSR1LSR1 BGL2P15703 313 aaKnown RBP7.36□□□□□ -1.23
LSR1LSR1 UBS1P38290 277 aa7.36□□□□□ -1.23
LSR1LSR1 RTC3P38804 111 aaPredicted RBP7.36□□□□□ -1.23
LSR1LSR1 GLC8P41818 229 aa7.36□□□□□ -1.23
LSR1LSR1 TTI2P47168 421 aa7.36□□□□□ -1.23
LSR1LSR1 YGR050CP53231 118 aa7.36□□□□□ -1.23
LSR1LSR1 ELA1P53861 379 aaPredicted RBP7.36□□□□□ -1.23
LSR1LSR1 DAL4Q04895 635 aa7.36□□□□□ -1.23
LSR1LSR1 UPS1Q05776 175 aa7.36□□□□□ -1.23
LSR1LSR1 BOL1Q3E793 110 aa7.36□□□□□ -1.23
LSR1LSR1 YCL001W-BQ96VH2 84 aa7.36□□□□□ -1.23
LSR1LSR1 Q0144Q9ZZW2 109 aa7.36□□□□□ -1.23
LSR1LSR1 ILV5P06168 395 aaKnown RBP7.35□□□□□ -1.23
LSR1LSR1 RPS22AP0C0W1 130 aaKnown RBP7.35□□□□□ -1.23
LSR1LSR1 URA5P13298 226 aaKnown RBP7.35□□□□□ -1.23
LSR1LSR1 COQ3P27680 312 aa7.35□□□□□ -1.23
LSR1LSR1 TCA17P32613 152 aa7.35□□□□□ -1.23
LSR1LSR1 UIP3P39547 235 aa7.35□□□□□ -1.23
LSR1LSR1 YER084WP40057 128 aa7.35□□□□□ -1.23
LSR1LSR1 EGT2P42835 1041 aa7.35□□□□□ -1.23
LSR1LSR1 YGR149WP48236 432 aa7.35□□□□□ -1.23
LSR1LSR1 STP4Q07351 490 aa7.35□□□□□ -1.23
LSR1LSR1 RRS1Q08746 203 aaKnown RBP7.35□□□□□ -1.23
LSR1LSR1 RPL7AP05737 244 aaKnown RBP7.34□□□□□ -1.23
LSR1LSR1 RPL31AP0C2H8 113 aaKnown RBP7.34□□□□□ -1.23
LSR1LSR1 RPL31BP0C2H9 113 aaKnown RBP7.34□□□□□ -1.23
LSR1LSR1 STE4P18851 423 aa7.34□□□□□ -1.23
LSR1LSR1 YBL059WP34224 193 aa7.34□□□□□ -1.23
LSR1LSR1 MIA40P36046 403 aa7.34□□□□□ -1.23
LSR1LSR1 CUE1P38428 203 aa7.34□□□□□ -1.23
LSR1LSR1 RPB11P38902 120 aa7.34□□□□□ -1.23
LSR1LSR1 PCL7P40186 285 aa7.34□□□□□ -1.23
LSR1LSR1 PIG2P40187 538 aa7.34□□□□□ -1.23
LSR1LSR1 LOC1P43586 204 aaPredicted RBP7.34□□□□□ -1.23
LSR1LSR1 ARP3P47117 449 aaKnown RBP7.34□□□□□ -1.23
LSR1LSR1 YIP5P53108 310 aa7.34□□□□□ -1.23
LSR1LSR1 DAD3P69850 94 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms