RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CCDC77Q9BR77 488 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 KIAA1586Q9HCI6 787 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 SEPT9Q9UHD8 586 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-233ENST00000642021 NUB1Q9Y5A7 615 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 COL4A5P29400 1685 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 EXOC1LA0A1B0GW35 172 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 POC1B-GALNT4F8VUJ3 575 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 WNT10BO00744 389 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 PLSCR1O15162 318 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 ECM2O94769 699 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-233ENST00000642021 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-233ENST00000642021 KCNA2P16389 499 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 PKN2Q16513 984 aaKnown RBP14.64□□□□□ -0.07
PHGDH-233ENST00000642021 LIN9Q5TKA1 542 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 RNF43Q68DV7 783 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 LARGE2Q8N3Y3 721 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 BBOF1Q8ND07 529 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 DENND1AQ8TEH3 1009 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 MRRFQ96E11 262 aaKnown RBP14.64□□□□□ -0.07
PHGDH-233ENST00000642021 CYP26B1Q9NR63 512 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 ACTL7BQ9Y614 415 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 DGAT1O75907 488 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ATF7P17544 494 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 MSH2P43246 934 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 PSMC4P43686 418 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ZNF252P-AS1Q0IIN9 211 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 MKRN3Q13064 507 aaKnown RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 PPP1R21Q6ZMI0 780 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 PHF13Q86YI8 300 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 C4orf33Q8N1A6 199 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 OR5B17Q8NGF7 314 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 FEZF2Q8TBJ5 459 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ZNF526Q8TF50 670 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 UTP4Q969X6 686 aaKnown RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 TMEM143Q96AN5 459 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 HAUS1Q96CS2 278 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 MRPL47Q9HD33 250 aaKnown RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 MAP3K20Q9NYL2 800 aaKnown RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ZNF148Q9UQR1 794 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 IVNS1ABPQ9Y6Y0 642 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 F8VP50 259 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 DNALI1O14645 258 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 IL9RQ01113 521 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 PRKCEQ02156 737 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 WDR72Q3MJ13 1102 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 MTERF2Q49AM1 385 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ZFYVE27Q5T4F4 411 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 LPAR1Q92633 364 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 ATG4CQ96DT6 458 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
PHGDH-233ENST00000642021 AGO2Q9UKV8 859 aaKnown RBP14.63□□□□□ -0.07
PHGDH-233ENST00000642021 BANF1O75531 89 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 PIAS1O75925 651 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 EDN1P05305 212 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 CCNB1P14635 433 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ARSEP51690 589 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 OGDHQ02218 1023 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 MTMR2Q13614 643 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ERICH1Q86X53 443 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ATP6V0A1Q93050 837 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 SLITRK1Q96PX8 696 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 SENP7Q9BQF6 1050 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 MYLK2Q9H1R3 596 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 C15orf41Q9Y2V0 281 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 A0A1W2PPM1 405 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 UNC5CO95185 931 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ABHD2P08910 425 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 FGFR1P11362 822 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 GBP2P32456 591 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-233ENST00000642021 RPA3P35244 121 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-233ENST00000642021 GPS1Q13098 491 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ACVR2BQ13705 512 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 CCDC142Q17RM4 750 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 MCPH1Q8NEM0 835 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 RDM1Q8NG50 284 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ZNF606Q8WXB4 792 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 IFT74Q96LB3 600 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 RPAP3Q9H6T3 665 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-233ENST00000642021 ETNK1Q9HBU6 452 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 VWA5AO00534 786 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 GAD2Q05329 585 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 SLC1A5Q15758 541 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 VCPIP1Q96JH7 1222 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 CFAP57Q96MR6 1250 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 TRABDQ9H4I3 376 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 C10orf88Q9H8K7 445 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 RNF146Q9NTX7 359 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-233ENST00000642021 PHTF1Q9UMS5 762 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 CHKBQ9Y259 395 aa14.62□□□□□ -0.07
PHGDH-233ENST00000642021 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
PHGDH-233ENST00000642021 TMEM191CA6NGB0 347 aa14.61□□□□□ -0.07
PHGDH-233ENST00000642021 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
PHGDH-233ENST00000642021 CST3P01034 146 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-233ENST00000642021 TMEM191BP0C7N4 346 aa14.61□□□□□ -0.07
PHGDH-233ENST00000642021 ATP4AP20648 1035 aa14.61□□□□□ -0.07
PHGDH-233ENST00000642021 HSPA1LP34931 641 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms