RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.55
CASC19-229ENST00000641418 TRIM29Q14134 588 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 TFDP1Q14186 410 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 CALCRLQ16602 461 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 PPFIBP1Q86W92 1011 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.55
CASC19-229ENST00000641418 BCL7CQ8WUZ0 217 aaPredicted RBP11.65□□□□□ -0.55
CASC19-229ENST00000641418 AUTS2Q8WXX7 1259 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 RIPOR3Q96MK2 946 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 TMEM175Q9BSA9 504 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.55
CASC19-229ENST00000641418 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 XPNPEP1Q9NQW7 623 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 ANKEF1Q9NU02 776 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 FAN1Q9Y2M0 1017 aa11.65□□□□□ -0.55
CASC19-229ENST00000641418 DDHD2O94830 711 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 TXKP42681 527 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 MTHFRP42898 656 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 NEK4P51957 841 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 POU5F1BQ06416 359 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 C19orf57Q0VDD7 668 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 PTPN21Q16825 1174 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 ATAT1Q5SQI0 421 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 ALYREFQ86V81 257 aaKnown RBP11.64□□□□□ -0.55
CASC19-229ENST00000641418 SUGP1Q8IWZ8 645 aaKnown RBP11.64□□□□□ -0.55
CASC19-229ENST00000641418 DIS3L2Q8IYB7 885 aaKnown RBP11.64□□□□□ -0.55
CASC19-229ENST00000641418 C12orf76Q8N812 135 aaPredicted RBP11.64□□□□□ -0.55
CASC19-229ENST00000641418 SLC22A17Q8WUG5 538 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 EMILIN2Q9BXX0 1053 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 BACH2Q9BYV9 841 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 POMKQ9H5K3 350 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 KIAA1522Q9P206 1035 aaPredicted RBP11.64□□□□□ -0.55
CASC19-229ENST00000641418 STK17AQ9UEE5 414 aa11.64□□□□□ -0.55
CASC19-229ENST00000641418 A0A0A0MRY4 1105 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 INO80B-WBP1J3KQ70 363 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 NRP1O14786 923 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 B4GALT3O60512 393 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 NEMFO60524 1076 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 TSPAN1O60635 241 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 POMCP01189 267 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 XRCC6P12956 609 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■□□ 17
CASC19-229ENST00000641418 ITGA4P13612 1032 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 EPCAMP16422 314 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
CASC19-229ENST00000641418 ARL2P36404 184 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 NHLH1Q02575 133 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 PTPN14Q15678 1187 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 TSNAXIP1Q2TAA8 658 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 RARS2Q5T160 578 aaKnown RBP11.63□□□□□ -0.55
CASC19-229ENST00000641418 ERICH6BQ5W0A0 696 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 NOTUMQ6P988 496 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 FBXL6Q8N531 539 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 SMG8Q8ND04 991 aaKnown RBP11.63□□□□□ -0.55
CASC19-229ENST00000641418 CCDC51Q96ER9 411 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 ASIC4Q96FT7 647 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 MTMR9Q96QG7 549 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 PRRX2Q99811 253 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 VN1R3Q9BXE9 311 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 CSRNP2Q9H175 543 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 GPN3Q9UHW5 284 aaPredicted RBP11.63□□□□□ -0.55
CASC19-229ENST00000641418 CDH22Q9UJ99 828 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 IPPQ9Y573 584 aa11.63□□□□□ -0.55
CASC19-229ENST00000641418 C2CD4DB7Z1M9 353 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 RNF225M0QZC1 329 aaPredicted RBP11.62□□□□□ -0.55
CASC19-229ENST00000641418 JAK2O60674 1132 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 WEE2P0C1S8 567 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 KLRC2P26717 231 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 RARRES1P49788 294 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 ZNF423Q2M1K9 1284 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 SV2BQ7L1I2 683 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 CABP7Q86V35 215 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 FMR1NBQ8N0W7 255 aaPredicted RBP11.62□□□□□ -0.55
CASC19-229ENST00000641418 KREMEN2Q8NCW0 462 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 CCDC43Q96MW1 224 aaKnown RBP11.62□□□□□ -0.55
CASC19-229ENST00000641418 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
CASC19-229ENST00000641418 NFKBIZQ9BYH8 718 aa11.62□□□□□ -0.55
CASC19-229ENST00000641418 MRPL17Q9NRX2 175 aaKnown RBP11.62□□□□□ -0.55
CASC19-229ENST00000641418 A0A087WWV3 80 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 ARL5CA6NH57 179 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 INPPL1O15357 1258 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 SSBP05455 408 aaKnown RBP eCLIP11.61□□□□□ -0.55
CASC19-229ENST00000641418 CNPP09543 421 aaKnown RBP11.61□□□□□ -0.55
CASC19-229ENST00000641418 GLRA2P23416 452 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 MBTD1Q05BQ5 628 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 CAPSQ13938 189 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 SUZ12Q15022 739 aaKnown RBP11.61□□□□□ -0.55
CASC19-229ENST00000641418 SETDB1Q15047 1291 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 SAFBQ15424 915 aaKnown RBP eCLIP11.61□□□□□ -0.55
CASC19-229ENST00000641418 KIAA1841Q6NSI8 718 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 TXNDC11Q6PKC3 985 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 TMC5Q6UXY8 1006 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 COLGALT2Q8IYK4 626 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 UBALD2Q8IYN6 164 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 HACE1Q8IYU2 909 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 PIGOQ8TEQ8 1089 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 GAD1Q99259 594 aa11.61□□□□□ -0.55
CASC19-229ENST00000641418 TRIM6Q9C030 488 aaPredicted RBP11.61□□□□□ -0.55
CASC19-229ENST00000641418 DBR1Q9UK59 544 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms