RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 BEND6Q5SZJ8 279 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-208ENST00000641023 TTC39CQ8N584 583 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 SNX27Q96L92 541 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 ZSWIM1Q9BR11 485 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 GTF2IRD1Q9UHL9 959 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 SCINQ9Y6U3 715 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 CCDC66A2RUB6 948 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 M0QZ92 97 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 MYO1FO00160 1098 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 KRIT1O00522 736 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 PAEPP09466 180 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 SSTR3P32745 418 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-208ENST00000641023 NKX3-2P78367 333 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 NBPF20Q3BBV1 942 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 RSPH3Q86UC2 560 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 BTBD6Q96KE9 485 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 CELF4Q9BZC1 486 aaKnown RBP18.39■□□□□ 0.53
PHGDH-208ENST00000641023 STIM2Q9P246 746 aa18.39■□□□□ 0.53
PHGDH-208ENST00000641023 FGGP02679 453 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 MMP8P22894 467 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 RAP1GAPP47736 663 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CDH8P55286 799 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 RNPC3Q96LT9 517 aaKnown RBP18.38■□□□□ 0.53
PHGDH-208ENST00000641023 KRT12Q99456 494 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 XPNPEP3Q9NQH7 507 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 OGFRQ9NZT2 677 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 DMGDHQ9UI17 866 aaKnown RBP18.38■□□□□ 0.53
PHGDH-208ENST00000641023 HES2Q9Y543 173 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CALB1P05937 261 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CD19P15391 556 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 SLC1A1P43005 524 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 GUCY2FP51841 1108 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 C2CD6Q53TS8 623 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 DCAF12L1Q5VU92 463 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 MMS22LQ6ZRQ5 1243 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 BEST2Q8NFU1 509 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 HDAC7Q8WUI4 952 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 ALG3Q92685 438 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CD101Q93033 1021 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 NXF3Q9H4D5 531 aaKnown RBP18.38■□□□□ 0.53
PHGDH-208ENST00000641023 PARVAQ9NVD7 372 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CNTN3Q9P232 1028 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CITO14578 2027 aa18.38■□□□□ 0.53
PHGDH-208ENST00000641023 CILPO75339 1184 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 ZMYND10O75800 440 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 CDH5P33151 784 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 CTNNA1P35221 906 aaKnown RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 RAD23BP54727 409 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 TRIM32Q13049 653 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 PLEKHA7Q6IQ23 1121 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 ALKAL1Q6UXT8 129 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 CCNI2Q6ZMN8 369 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 TFAP2BQ92481 460 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 AP1M1Q9BXS5 423 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 SMYD3Q9H7B4 428 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 L1RE1Q9UN81 338 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 PCDHA3Q9Y5H8 950 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 ADAMTS4O75173 837 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 RECQL4O94761 1208 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 RPLP2P05387 115 aaKnown RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 CTNNA2P26232 953 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 HOXD10P28358 340 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 PEX5P50542 639 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 SLC7A5Q01650 507 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 PTP4A2Q12974 167 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 ZBTB6Q15916 424 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 PHLDB2Q86SQ0 1253 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 KLHL7Q8IXQ5 586 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 TMEM130Q8N3G9 435 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 C1orf131Q8NDD1 294 aaKnown RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 KRT35Q92764 455 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 TMEM176AQ96HP8 235 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 ZMAT2Q96NC0 199 aaKnown RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 TSPAN18Q96SJ8 248 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 FUT8Q9BYC5 575 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 SDCBP2Q9H190 292 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 RNF186Q9NXI6 227 aa18.37■□□□□ 0.53
PHGDH-208ENST00000641023 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 TRIP12Q14669 1992 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-208ENST00000641023 CENPFP49454 3210 aa18.36■□□□□ 0.53
PHGDH-208ENST00000641023 PRKAR2AP13861 404 aaKnown RBP18.36■□□□□ 0.53
PHGDH-208ENST00000641023 MRPS6P82932 125 aaKnown RBP18.36■□□□□ 0.53
PHGDH-208ENST00000641023 HDXQ7Z353 690 aa18.36■□□□□ 0.53
PHGDH-208ENST00000641023 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
PHGDH-208ENST00000641023 LHX5Q9H2C1 402 aa18.36■□□□□ 0.53
PHGDH-208ENST00000641023 BARX2Q9UMQ3 279 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-208ENST00000641023 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 XPOTO43592 962 aaKnown RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 ASGR1P07306 291 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 AKAP5P24588 427 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 RWDD2BP57060 319 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 PTPN11Q06124 597 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 PPP2R5EQ16537 467 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 SEL1L2Q5TEA6 688 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 GDF6Q6KF10 455 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 ERICH1Q86X53 443 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 IFT20Q8IY31 132 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms