RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 SYT3Q9BQG1 590 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 RNF26Q9BY78 433 aaPredicted RBP6.79□□□□□ -1.32
ATM-229ENST00000639953 CSRNP2Q9H175 543 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 TMEM60Q9H2L4 133 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 VAT1LQ9HCJ6 419 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 GPRC5CQ9NQ84 441 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 SPATA6Q9NWH7 488 aaPredicted RBP6.79□□□□□ -1.32
ATM-229ENST00000639953 TMEM260Q9NX78 707 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 FLRT1Q9NZU1 646 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 NOL7Q9UMY1 257 aaKnown RBP6.79□□□□□ -1.32
ATM-229ENST00000639953 BACE2Q9Y5Z0 518 aa6.79□□□□□ -1.32
ATM-229ENST00000639953 ZNF236Q9UL36 1845 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 LCTP09848 1927 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 C7orf72A4D263 438 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 SH3D21A4FU49 640 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 GOLGA6L4A6NEF3 574 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 SLC15A5A6NIM6 579 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 KLRF2D3W0D1 207 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 CUTAO60888 179 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 PPP6R2O75170 966 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 DDAH1O94760 285 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 PGK2P07205 417 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 PARP1P09874 1014 aaKnown RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 ALAS1P13196 640 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 NT5C2P49902 561 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 PRMT2P55345 433 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 SOX10P56693 466 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 GOLGA8FQ08AF8 430 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 GOLGA8DPQ0D2H9 430 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 GRB14Q14449 540 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 PFKFB3Q16875 520 aaPredicted RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 USH1GQ495M9 461 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 ASPRV1Q53RT3 343 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 GPATCH4Q5T3I0 446 aaKnown RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 KIAA1211LQ6NV74 962 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 KRBA2Q6ZNG9 492 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 CATIPQ7Z7H3 387 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 B3GNT8Q7Z7M8 397 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 ZSCAN30Q86W11 494 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 ADGRF4Q8IZF3 695 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 TMTC2Q8N394 836 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 AOPEPQ8N6M6 819 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 SHCBP1Q8NEM2 672 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 USP33Q8TEY7 942 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 DDX1Q92499 740 aaKnown RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 TRIB2Q92519 343 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 STAMQ92783 540 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 GPRASP2Q96D09 838 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 TSPAN17Q96FV3 270 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 RCC1LQ96I51 464 aaKnown RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 SHDQ96IW2 340 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 MMP19Q99542 508 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 TEX13BQ9BXU2 312 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 RANBP17Q9H2T7 1088 aaKnown RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 FOXP1Q9H334 677 aaPredicted RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 APEX2Q9UBZ4 518 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 TUBE1Q9UJT0 475 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 MAN1B1Q9UKM7 699 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 CCPG1Q9ULG6 757 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.78□□□□□ -1.32
ATM-229ENST00000639953 ZKSCAN5Q9Y2L8 839 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 DUSP10Q9Y6W6 482 aa6.78□□□□□ -1.32
ATM-229ENST00000639953 NPHP3-ACAD11A0A0J9YXS1 232 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 PP2D1A8MPX8 630 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 ATP2A1O14983 1001 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 CDKL5O76039 1030 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 SLC25A27O95847 323 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 FUCA1P04066 466 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 FCER1AP12319 257 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 ATP1A3P13637 1013 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 PAMP19021 973 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 CDC25AP30304 524 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 RGS2P41220 211 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 SARSP49591 514 aaKnown RBP6.77□□□□□ -1.33
ATM-229ENST00000639953 RCAN1P53805 252 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 CDC37Q16543 378 aaPredicted RBP6.77□□□□□ -1.33
ATM-229ENST00000639953 QRICH1Q2TAL8 776 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 ZFYVE27Q5T4F4 411 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 SYNE3Q6ZMZ3 975 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 DBX2Q6ZNG2 339 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 CCDC73Q6ZRK6 1079 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 DPP9Q86TI2 863 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 C19orf47Q8N9M1 422 aaKnown RBP6.77□□□□□ -1.33
ATM-229ENST00000639953 KCNG4Q8TDN1 519 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 CACTINQ8WUQ7 758 aaKnown RBP6.77□□□□□ -1.33
ATM-229ENST00000639953 SOCS4Q8WXH5 440 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 ZNF333Q96JL9 665 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 APBA2Q99767 749 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 MROH8Q9H579 483 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 JMJD4Q9H9V9 463 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 RNF146Q9NTX7 359 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 INTS13Q9NVM9 706 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 CLEC1BQ9P126 229 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 PCDHA6Q9UN73 950 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 AKT3Q9Y243 479 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 PCDHA8Q9Y5H6 950 aa6.77□□□□□ -1.33
ATM-229ENST00000639953 SRPRBQ9Y5M8 271 aaKnown RBP6.77□□□□□ -1.33
ATM-229ENST00000639953 RBBP6Q7Z6E9 1792 aaKnown RBP6.77□□□□□ -1.33
ATM-229ENST00000639953 MCM3APO60318 1980 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms