RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 HSPA6P17066 643 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 SLC1A1P43005 524 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 EPHB4P54760 987 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 ADAM17P78536 824 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 GUCY2DQ02846 1103 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
PAX6-261ENST00000639943 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 SEL1L2Q5TEA6 688 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 CCDC26Q8TAB7 109 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 C11orf70Q9BRQ4 267 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 UBXN6Q9BZV1 441 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 PLEKHA5Q9HAU0 1116 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 ITGA11Q9UKX5 1188 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 PCDHGC3Q9UN70 934 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 SCINQ9Y6U3 715 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 CA12O43570 354 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 AKR1A1P14550 325 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.32
PAX6-261ENST00000639943 FGFR4P22455 802 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 FSCN1Q16658 493 aaKnown RBP13.02□□□□□ -0.32
PAX6-261ENST00000639943 ZNF394Q53GI3 561 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 SLC27A1Q6PCB7 646 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 GSPT2Q8IYD1 628 aaKnown RBP13.02□□□□□ -0.32
PAX6-261ENST00000639943 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 CXorf38Q8TB03 319 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 HINFPQ9BQA5 517 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 CYP3A43Q9HB55 503 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 EPB41L5Q9HCM4 733 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 CEP83Q9Y592 693 aa13.02□□□□□ -0.32
PAX6-261ENST00000639943 NPTXRO95502 500 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 GNAT1P11488 350 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 ITGA4P13612 1032 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 AXLP30530 894 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.33
PAX6-261ENST00000639943 RWDD2BP57060 319 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 RBP5P82980 135 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 LACTBP83111 547 aaPredicted RBP13.02□□□□□ -0.33
PAX6-261ENST00000639943 BEX3Q00994 111 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 PAK2Q13177 524 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 ZNF211Q13398 564 aaPredicted RBP13.02□□□□□ -0.33
PAX6-261ENST00000639943 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 NOTUMQ6P988 496 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 EMBQ6PCB8 327 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 DERAQ9Y315 318 aa13.02□□□□□ -0.33
PAX6-261ENST00000639943 CARNS1A5YM72 827 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 MED7O43513 233 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 KPNA6O60684 536 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 CALB1P05937 261 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 PAEPP09466 180 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 SSTR3P32745 418 aaPredicted RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 CDH5P33151 784 aaPredicted RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 EIF1ADQ8N9N8 165 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 DNAJB3Q8WWF6 145 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 OSMRQ99650 979 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 PLVAPQ9BX97 442 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 FAM124BQ9H5Z6 455 aaPredicted RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 CDHR5Q9HBB8 845 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 PARVAQ9NVD7 372 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 DPP3Q9NY33 737 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 ABT1Q9ULW3 272 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 C17orf102A2RUQ5 167 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 DUSP11O75319 330 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 MMP8P22894 467 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
PAX6-261ENST00000639943 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 FCGRTP55899 365 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 NNTQ13423 1086 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 NME8Q8N427 588 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.01□□□□□ -0.33
PAX6-261ENST00000639943 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
PAX6-261ENST00000639943 TREHO43280 583 aa13□□□□□ -0.33
PAX6-261ENST00000639943 PROSCO94903 275 aa13□□□□□ -0.33
PAX6-261ENST00000639943 YARSP54577 528 aaKnown RBP13□□□□□ -0.33
PAX6-261ENST00000639943 PURAQ00577 322 aaKnown RBP13□□□□□ -0.33
PAX6-261ENST00000639943 HIC1Q14526 733 aa13□□□□□ -0.33
PAX6-261ENST00000639943 C2CD6Q53TS8 623 aa13□□□□□ -0.33
PAX6-261ENST00000639943 PHLDB2Q86SQ0 1253 aa13□□□□□ -0.33
PAX6-261ENST00000639943 TTC39CQ8N584 583 aa13□□□□□ -0.33
PAX6-261ENST00000639943 TFAP2BQ92481 460 aa13□□□□□ -0.33
PAX6-261ENST00000639943 CAVIN3Q969G5 261 aa13□□□□□ -0.33
PAX6-261ENST00000639943 HHIPL1Q96JK4 782 aa13□□□□□ -0.33
PAX6-261ENST00000639943 LCMT1Q9UIC8 334 aa13□□□□□ -0.33
PAX6-261ENST00000639943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms