RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TTLL11Q8NHH1 800 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 ATP2A3Q93084 1043 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 RGMAQ96B86 450 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 SENP6Q9GZR1 1112 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-220ENST00000639841 PRDM5Q9NQX1 630 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-220ENST00000639841 TRMT1Q9NXH9 659 aaKnown RBP8.11□□□□□ -1.11
NECAP1-220ENST00000639841 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 RNF112Q9ULX5 631 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 CNPY2Q9Y2B0 182 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 MAP3K15Q6ZN16 1313 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 KDM3BQ7LBC6 1761 aa8.11□□□□□ -1.11
NECAP1-220ENST00000639841 NUP98P52948 1817 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 KITP10721 976 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 KRT15P19012 456 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 VAMP2P63027 116 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 RNF4P78317 190 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 E2F5Q15329 346 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 MMEL1Q495T6 779 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 SNX30Q5VWJ9 437 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 ZNF765Q7L2R6 523 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 AVL9Q8NBF6 648 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 GOT1L1Q8NHS2 421 aaPredicted RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 GDF15Q99988 308 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 CD244Q9BZW8 370 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 KCTD10Q9H3F6 313 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 PRDM13Q9H4Q3 707 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 MLXIPQ9HAP2 919 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 XAB2Q9HCS7 855 aaKnown RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 BABAM1Q9NWV8 329 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 BLOC1S6Q9UL45 172 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 MAN2B2Q9Y2E5 1009 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 SF3B6Q9Y3B4 125 aaKnown RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 ANKRD36CQ5JPF3 1778 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 hCG_1807616A0A1W2PRN6 198 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 TCRBV5S4A2TA0A5A2 114 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 BBOX1O75936 387 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 ALAS1P13196 640 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 LBRQ14739 615 aaKnown RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 ISM2Q6H9L7 571 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 CDC37L1Q7L3B6 337 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 AUTS2Q8WXX7 1259 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 MXD3Q9BW11 206 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
NECAP1-220ENST00000639841 GPRC5DQ9NZD1 345 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 CLEC1BQ9P126 229 aa8.1□□□□□ -1.11
NECAP1-220ENST00000639841 C2orf71A6NGG8 1288 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 LRRC14BA6NHZ5 514 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 AURKAO14965 403 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 TMEM63AO94886 807 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 GOSR1O95249 250 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 DLGAP3O95886 979 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 MTHFD2P13995 350 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 BRAFP15056 766 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 RPS12P25398 132 aaKnown RBP8.09□□□□□ -1.11
NECAP1-220ENST00000639841 SLC7A1P30825 629 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 PRKAR2BP31323 418 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 GGCXP38435 758 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 PHKA1P46020 1223 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 CLCN2P51788 898 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 BCAR1P56945 870 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 UBE3AQ05086 875 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 UBXN11Q5T124 520 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-220ENST00000639841 CDH24Q86UP0 819 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 PANK1Q8TE04 598 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 N4BP2L2Q92802 583 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-220ENST00000639841 SPATA17Q96L03 361 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 C2orf40Q9H1Z8 148 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 OR10A4Q9H209 315 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 COL20A1Q9P218 1284 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 ATP6V0A2Q9Y487 856 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 USP16Q9Y5T5 823 aa8.09□□□□□ -1.11
NECAP1-220ENST00000639841 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PPIP5K2O43314 1243 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 B3GALNT1O75752 331 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ARF3P61204 181 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 NKX6-1P78426 367 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ARF1P84077 181 aaKnown RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PPARDQ03181 441 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 KCNAB2Q13303 367 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 MTA1Q13330 715 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 FGL2Q14314 439 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 INF2Q27J81 1249 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ADCK5Q3MIX3 580 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ZBTB41Q5SVQ8 909 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CEP97Q8IW35 865 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CEP70Q8NHQ1 597 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 RUBCNQ92622 972 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CNDP2Q96KP4 475 aaKnown RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 TSGA13Q96PP4 275 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 KCNJ15Q99712 375 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms