RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 COLEC11Q9BWP8 271 aa10.3□□□□□ -0.76
PAX6-246ENST00000638963 ADAM28Q9UKQ2 775 aa10.3□□□□□ -0.76
PAX6-246ENST00000638963 L1RE1Q9UN81 338 aa10.3□□□□□ -0.76
PAX6-246ENST00000638963 TMEM189-UBE2V1I3L0A0 370 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 CYB561D2O14569 222 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 CD58P19256 250 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 TKTP29401 623 aaKnown RBP10.29□□□□□ -0.76
PAX6-246ENST00000638963 ATICP31939 592 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 AARSP49588 968 aaKnown RBP eCLIP10.29□□□□□ -0.76
PAX6-246ENST00000638963 POLR2FP61218 127 aaKnown RBP10.29□□□□□ -0.76
PAX6-246ENST00000638963 TNNC1P63316 161 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 SLC20A2Q08357 652 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 ARHGAP44Q17R89 818 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 KLHDC7AQ5VTJ3 777 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 WSCD1Q658N2 575 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 FUT10Q6P4F1 479 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 TMC6Q7Z403 805 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 OSTM1Q86WC4 334 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 VSTM4Q8IW00 320 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 KLHL23Q8NBE8 558 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 MRPL45Q9BRJ2 306 aaKnown RBP10.29□□□□□ -0.76
PAX6-246ENST00000638963 IMPG2Q9BZV3 1241 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 NIF3L1Q9GZT8 377 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 UBE2TQ9NPD8 197 aaPredicted RBP10.29□□□□□ -0.76
PAX6-246ENST00000638963 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 SPG21Q9NZD8 308 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 DNAJC12Q9UKB3 198 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 NME7Q9Y5B8 376 aa10.29□□□□□ -0.76
PAX6-246ENST00000638963 COL4A4P53420 1690 aaPredicted RBP10.28□□□□□ -0.76
PAX6-246ENST00000638963 LAMA3Q16787 3333 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 A0A1W2PQC6 194 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 EPOPA6NHQ4 379 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 FGF18O76093 207 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
PAX6-246ENST00000638963 DNAJB2P25686 324 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 BMPR1AP36894 532 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 PNPLA4P41247 253 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 CUL2Q13617 745 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 CCDC142Q17RM4 750 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 FAM171A1Q5VUB5 890 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 CEP57Q86XR8 500 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 SPC24Q8NBT2 197 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 NEK11Q8NG66 645 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 CPLX3Q8WVH0 158 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 AUTS2Q8WXX7 1259 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 TAF4BQ92750 862 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 SUSD3Q96L08 255 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 ALG13Q9NP73 1137 aaKnown RBP10.28□□□□□ -0.76
PAX6-246ENST00000638963 PLCB1Q9NQ66 1216 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 GDAP2Q9NXN4 497 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 BCCIPQ9P287 314 aaKnown RBP eCLIP10.28□□□□□ -0.76
PAX6-246ENST00000638963 APEX2Q9UBZ4 518 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 MSRAQ9UJ68 235 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 PCDHB12Q9Y5F1 795 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 PCDHGC5Q9Y5F6 944 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 ATG2AQ2TAZ0 1938 aa10.28□□□□□ -0.76
PAX6-246ENST00000638963 SF3B1O75533 1304 aaKnown RBP eCLIP10.27□□□□□ -0.768e-6■■■■■ 107
PAX6-246ENST00000638963 M0QZQ0 153 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 RFXAPO00287 272 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 C2CD2LO14523 706 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 EFEMP2O95967 443 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 TPM3P06753 285 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 UCHL3P15374 230 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 ACAT1P24752 427 aaKnown RBP10.27□□□□□ -0.76
PAX6-246ENST00000638963 DNAJB1P25685 340 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 CCDC173Q0VFZ6 552 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 RAB30Q15771 203 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 RTP2Q5QGT7 225 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 ADGRF2Q8IZF7 708 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 TMEM169Q96HH4 297 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 MRFAP1L1Q96HT8 127 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 TWNKQ96RR1 684 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 TGS1Q96RS0 853 aaKnown RBP10.27□□□□□ -0.76
PAX6-246ENST00000638963 NAA15Q9BXJ9 866 aaKnown RBP10.27□□□□□ -0.76
PAX6-246ENST00000638963 BCO2Q9BYV7 579 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 GPR88Q9GZN0 384 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 AAASQ9NRG9 546 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.76
PAX6-246ENST00000638963 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.76
PAX6-246ENST00000638963 SOX1O00570 391 aaPredicted RBP10.26□□□□□ -0.77
PAX6-246ENST00000638963 GRM6O15303 877 aa10.26□□□□□ -0.77
PAX6-246ENST00000638963 HUS1O60921 280 aa10.26□□□□□ -0.77
PAX6-246ENST00000638963 GYPCP04921 128 aa10.26□□□□□ -0.77
PAX6-246ENST00000638963 ODC1P11926 461 aa10.26□□□□□ -0.77
PAX6-246ENST00000638963 TRIM21P19474 475 aaKnown RBP10.26□□□□□ -0.77
PAX6-246ENST00000638963 ACO1P21399 889 aaKnown RBP10.26□□□□□ -0.77
PAX6-246ENST00000638963 LMO2P25791 158 aa10.26□□□□□ -0.77
PAX6-246ENST00000638963 FXR1P51114 621 aaKnown RBP eCLIP10.26□□□□□ -0.77
PAX6-246ENST00000638963 ERVK-21P61565 698 aa10.26□□□□□ -0.77
PAX6-246ENST00000638963 DRAP1Q14919 205 aaPredicted RBP10.26□□□□□ -0.77
PAX6-246ENST00000638963 ZNF394Q53GI3 561 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms