RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CENPCQ03188 943 aa23.14■■□□□ 1.29
SCARB2-212ENST00000638663 MYO1EQ12965 1108 aa23.14■■□□□ 1.29
SCARB2-212ENST00000638663 MCOLN2Q8IZK6 566 aa23.14■■□□□ 1.29
SCARB2-212ENST00000638663 TFAP2BQ92481 460 aa23.14■■□□□ 1.29
SCARB2-212ENST00000638663 NUP85Q9BW27 656 aa23.14■■□□□ 1.29
SCARB2-212ENST00000638663 CYP3A43Q9HB55 503 aa23.14■■□□□ 1.29
SCARB2-212ENST00000638663 CNOT8Q9UFF9 292 aaKnown RBP23.14■■□□□ 1.29
SCARB2-212ENST00000638663 UBQLN1Q9UMX0 589 aaKnown RBP23.14■■□□□ 1.29
SCARB2-212ENST00000638663 KIF4AO95239 1232 aa23.13■■□□□ 1.29
SCARB2-212ENST00000638663 HADHBP55084 474 aaKnown RBP23.13■■□□□ 1.29
SCARB2-212ENST00000638663 PTPN11Q06124 597 aaPredicted RBP23.13■■□□□ 1.29
SCARB2-212ENST00000638663 ORC1Q13415 861 aa23.13■■□□□ 1.29
SCARB2-212ENST00000638663 NT5DC3Q86UY8 548 aa23.13■■□□□ 1.29
SCARB2-212ENST00000638663 SH3TC2Q8TF17 1288 aa23.13■■□□□ 1.29
SCARB2-212ENST00000638663 TSEN34Q9BSV6 310 aaKnown RBP23.13■■□□□ 1.29
SCARB2-212ENST00000638663 HMGXB4Q9UGU5 601 aa23.13■■□□□ 1.29
SCARB2-212ENST00000638663 GPR182O15218 404 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 TLR3O15455 904 aaKnown RBP23.12■■□□□ 1.29
SCARB2-212ENST00000638663 GHRP10912 638 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 RAD23BP54727 409 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 C2CD6Q53TS8 623 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 XKR4Q5GH76 650 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 WHAMMQ8TF30 809 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 ANKRD7Q92527 254 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 ABCB6Q9NP58 842 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 EHD2Q9NZN4 543 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 AMFRQ9UKV5 643 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 STXBP5LQ9Y2K9 1186 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 CILPO75339 1184 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 KCNE1P15382 129 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 CD19P15391 556 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 CD52P31358 61 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 FBXO47Q5MNV8 452 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 PHLDB2Q86SQ0 1253 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 ZNF564Q8TBZ8 553 aaPredicted RBP23.12■■□□□ 1.29
SCARB2-212ENST00000638663 TWNKQ96RR1 684 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 EPC1Q9H2F5 836 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 CHST12Q9NRB3 414 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 FAM105AQ9NUU6 356 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 SMARCAL1Q9NZC9 954 aa23.12■■□□□ 1.29
SCARB2-212ENST00000638663 A0A1W2PQ45 241 aaPredicted RBP23.11■■□□□ 1.29
SCARB2-212ENST00000638663 A0A1W2PQY0 241 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 TRIM71Q2Q1W2 868 aaKnown RBP23.11■■□□□ 1.29
SCARB2-212ENST00000638663 C9orf57Q5W0N0 161 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 SMYD5Q6GMV2 418 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 MON1BQ7L1V2 547 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 C11orf70Q9BRQ4 267 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 ELOVL4Q9GZR5 314 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 PADI3Q9ULW8 664 aa23.11■■□□□ 1.29
SCARB2-212ENST00000638663 TMEM110-MUSTN1A8MSY1 372 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 KCNK3O14649 394 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 MTA2O94776 668 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 CCDC181Q5TID7 509 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 SLC4A11Q8NBS3 891 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 NOA1Q8NC60 698 aaKnown RBP23.1■■□□□ 1.29
SCARB2-212ENST00000638663 TRIM11Q96F44 468 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 MS4A14Q96JA4 679 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 CALR3Q96L12 384 aaKnown RBP23.1■■□□□ 1.29
SCARB2-212ENST00000638663 TRPV6Q9H1D0 765 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 ERVK-5Q9HDB9 667 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 UVRAGQ9P2Y5 699 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 SNX9Q9Y5X1 595 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 SCN1AP35498 2009 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 MEIS3P2A8K0S8 358 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 PAEPP09466 180 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 MYBL1P10243 752 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 ZSCAN20P17040 1043 aaPredicted RBP23.1■■□□□ 1.29
SCARB2-212ENST00000638663 RRM1P23921 792 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 RBM10P98175 930 aaKnown RBP23.1■■□□□ 1.29
SCARB2-212ENST00000638663 PAK2Q13177 524 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 MESDQ14696 234 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 LLGL2Q6P1M3 1020 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 LRRC52Q8N7C0 313 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 RABGGTAQ92696 567 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 BTBD6Q96KE9 485 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.1■■□□□ 1.29
SCARB2-212ENST00000638663 GOLGA2P5Q9HBQ8 144 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 STARD7Q9NQZ5 370 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 ADAM22Q9P0K1 906 aa23.1■■□□□ 1.29
SCARB2-212ENST00000638663 PDCD11Q14690 1871 aaKnown RBP23.09■■□□□ 1.29
SCARB2-212ENST00000638663 XPOTO43592 962 aaKnown RBP23.09■■□□□ 1.29
SCARB2-212ENST00000638663 CD4P01730 458 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 SOX4Q06945 474 aaPredicted RBP23.09■■□□□ 1.29
SCARB2-212ENST00000638663 LPIN1Q14693 890 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 ZNF618Q5T7W0 954 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 C11orf63Q6NUN7 778 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 MMS22LQ6ZRQ5 1243 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 PHF13Q86YI8 300 aaPredicted RBP23.09■■□□□ 1.29
SCARB2-212ENST00000638663 C1orf131Q8NDD1 294 aaKnown RBP23.09■■□□□ 1.29
SCARB2-212ENST00000638663 TMEM176AQ96HP8 235 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 HES6Q96HZ4 224 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 ZFP42Q96MM3 310 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 TSPAN18Q96SJ8 248 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 BARX2Q9UMQ3 279 aaPredicted RBP23.09■■□□□ 1.29
SCARB2-212ENST00000638663 ALG6Q9Y672 507 aa23.09■■□□□ 1.29
SCARB2-212ENST00000638663 ITGA4P13612 1032 aa23.08■■□□□ 1.29
SCARB2-212ENST00000638663 NDST1P52848 882 aa23.08■■□□□ 1.29
SCARB2-212ENST00000638663 INCA1Q0VD86 236 aa23.08■■□□□ 1.29
SCARB2-212ENST00000638663 AVENQ9NQS1 362 aaPredicted RBP23.08■■□□□ 1.29
SCARB2-212ENST00000638663 PCDHGC3Q9UN70 934 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms