RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
CACNA1A-250ENST00000637809 UBQLN1Q9UMX0 589 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-250ENST00000637809 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
CACNA1A-250ENST00000637809 MTMR11A4FU01 709 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 K7ESF4 209 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 PAPSS2O95340 614 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 PIGRP01833 764 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 NEFLP07196 543 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 TYMPP19971 482 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 CXCL12P48061 93 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 SOX9P48436 509 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 EPHB3P54753 998 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 PPP2R3AQ06190 1150 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 PLD1Q13393 1074 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 MYBPC2Q14324 1141 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 PPP2R5DQ14738 602 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 LPAL2Q16609 132 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 SPATA1Q5VX52 437 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 LAIR1Q6GTX8 287 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 TXNDC11Q6PKC3 985 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 GAREM2Q75VX8 874 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 SPEM1Q8N4L4 309 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 TMEM209Q96SK2 561 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 RBM12Q9NTZ6 932 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 C2orf42Q9NWW7 574 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 CDV3Q9UKY7 258 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-250ENST00000637809 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 A0A0B4J269 797 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 MYBPHLA2RUH7 354 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 HRO43593 1189 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 SOAT2O75908 522 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 MATR3P43243 847 aaKnown RBP eCLIP13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 LILRA4P59901 499 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 SPEM2Q0P670 501 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 KYAT1Q16773 422 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 C1orf228Q6PIY5 440 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 Q6ZS52 159 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 DNAJB7Q7Z6W7 309 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 USP37Q86T82 979 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 OR10T2Q8NGX3 314 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 BICD1Q96G01 975 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 CNTNAP3BQ96NU0 1288 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 TSPAN18Q96SJ8 248 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 CNTNAP3Q9BZ76 1288 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 C8orf33Q9H7E9 229 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 ACACBO00763 2458 aa13.18□□□□□ -0.3
CACNA1A-250ENST00000637809 TPRP12270 2363 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 DCDC2BA2VCK2 349 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 CHURC1-FNTBB4DL54 471 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 SPECC1L-ADORA2AF8WAN1 911 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 H0YCG3 227 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 OGTO15294 1046 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 RETP07949 1114 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 HOXC13P31276 330 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 CTHP32929 405 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 ALDH1A3P47895 512 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 FNTBP49356 437 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 LIG4P49917 911 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 ZNF131P52739 623 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 JADE1Q6IE81 842 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 YAF2Q8IY57 180 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 ZFYVE19Q96K21 471 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 SENP8Q96LD8 212 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 CPSF3Q9UKF6 684 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 RAB23Q9ULC3 237 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-250ENST00000637809 ANO9A1A5B4 782 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 PIRO00625 290 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 LRP3O75074 770 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 CYP11A1P05108 521 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 NFICP08651 508 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms