RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DSC3Q14574 896 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 PPP2R5EQ16537 467 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 FAM117BQ6P1L5 589 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 CCDC121Q6ZUS5 278 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 CDR2LQ86X02 465 aaPredicted RBP16.54■□□□□ 0.24
CLN8-209ENST00000635970 SFR1Q86XK3 245 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 SYCE1Q8N0S2 351 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 CCDC26Q8TAB7 109 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 MAGEC3Q8TD91 643 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLN8-209ENST00000635970 C2orf40Q9H1Z8 148 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
CLN8-209ENST00000635970 C17orf75Q9HAS0 396 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 PANK4Q9NVE7 773 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 LARSQ9P2J5 1176 aaKnown RBP16.54■□□□□ 0.24
CLN8-209ENST00000635970 ARHGAP28Q9P2N2 729 aa16.54■□□□□ 0.24
CLN8-209ENST00000635970 CHD9Q3L8U1 2897 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 C5orf60A6NFR6 353 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 TMCO5BA8MYB1 307 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 ATP2A2P16615 1042 aaKnown RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 EIF3BP55884 814 aaKnown RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 RAPGEF1Q13905 1077 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 TAS1R3Q7RTX0 852 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 FIZ1Q96SL8 496 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 GANQ9H2C0 597 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 KLC4Q9NSK0 619 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 TBC1D7Q9P0N9 293 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 SLC12A6Q9UHW9 1150 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 COL4A6Q14031 1691 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 ZSCAN5CA6NGD5 496 aaPredicted RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 K7ENM7 598 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 KCNK3O14649 394 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 EFCAB14O75071 495 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 UPP2O95045 317 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 PRKCBP05771 671 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 CCDC172P0C7W6 258 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 ARF4P18085 180 aaPredicted RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 NMT1P30419 496 aaKnown RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 CTNNA1P35221 906 aaKnown RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 RABGGTBP53611 331 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 NCKAP1LP55160 1127 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 CLUL1Q15846 466 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 RNF187Q5TA31 235 aaPredicted RBP16.53■□□□□ 0.24
CLN8-209ENST00000635970 RASGEF1CQ8N431 466 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 TMEM161BQ8NDZ6 487 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 SPIRE2Q8WWL2 714 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 SEC14L1Q92503 715 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 FGFBP2Q9BYJ0 223 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 FZD8Q9H461 694 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 RGS18Q9NS28 235 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 ADAMTS1Q9UHI8 967 aa16.53■□□□□ 0.24
CLN8-209ENST00000635970 A0A1W2PPC1 479 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 FRMD3A2A2Y4 597 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 CETN3O15182 167 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 AMHP03971 560 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 ECHS1P30084 290 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 PRKCIP41743 596 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 PPP2R2AP63151 447 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 IFT88Q13099 833 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 MAPK6Q16659 721 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 TWF2Q6IBS0 349 aaKnown RBP16.52■□□□□ 0.24
CLN8-209ENST00000635970 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 FAM178BQ8IXR5 827 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 CENPTQ96BT3 561 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 SLC9A7Q96T83 725 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 NTPCRQ9BSD7 190 aaKnown RBP16.52■□□□□ 0.24
CLN8-209ENST00000635970 FAM114A2Q9NRY5 505 aa16.52■□□□□ 0.24
CLN8-209ENST00000635970 PRMT7Q9NVM4 692 aaPredicted RBP16.52■□□□□ 0.24
CLN8-209ENST00000635970 FNDC1Q4ZHG4 1894 aaPredicted RBP16.52■□□□□ 0.23
CLN8-209ENST00000635970 CHD7Q9P2D1 2997 aa16.52■□□□□ 0.23
CLN8-209ENST00000635970 MYO1FO00160 1098 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 GFPT2O94808 682 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 LACTB2Q53H82 288 aaPredicted RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 SLFN11Q7Z7L1 901 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 HERC6Q8IVU3 1022 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 KLHL7Q8IXQ5 586 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 TTC7AQ9ULT0 858 aaPredicted RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 CNTNAP2Q9UHC6 1331 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 C9IYK1 514 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 K7ERI5 159 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 SOX1O00570 391 aaPredicted RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 SART1O43290 800 aaKnown RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 MAPTP10636 758 aaKnown RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 PBX2P40425 430 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 EFNA5P52803 228 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 SEC24CP53992 1094 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 ZNF844Q08AG5 666 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 ZC2HC1CQ53FD0 456 aaPredicted RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 HAUS6Q7Z4H7 955 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 TOP1MTQ969P6 601 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms